RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 CNTRLQ7Z7A1 2325 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 ZSCAN9O15535 394 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-203ENST00000434376 PRAMEF1O95521 474 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 HMGCS1Q01581 520 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 PFKPQ01813 784 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 GPSM1Q86YR5 675 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 CLVS1Q8IUQ0 354 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-203ENST00000434376 CCDC117Q8IWD4 279 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-203ENST00000434376 RNF168Q8IYW5 571 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-203ENST00000434376 LILRA2Q8N149 483 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 PXYLP1Q8TE99 480 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 TBCDQ9BTW9 1192 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 NSUN3Q9H649 340 aaKnown RBP15.43■□□□□ 0.06
SCARF1-203ENST00000434376 SLCO3A1Q9UIG8 710 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 DMTF1Q9Y222 760 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 FBP2O00757 339 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 INPP4BO15327 924 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 VPS26AO75436 327 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 RNASEH2AO75792 299 aaKnown RBP15.43■□□□□ 0.06
SCARF1-203ENST00000434376 SNRPB2P08579 225 aaKnown RBP15.43■□□□□ 0.06
SCARF1-203ENST00000434376 FAM189BP81408 668 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 DUS1LQ6P1R4 473 aaKnown RBP15.43■□□□□ 0.06
SCARF1-203ENST00000434376 PGM2L1Q6PCE3 622 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 ZNF461Q8TAF7 563 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 BTBD9Q96Q07 612 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 MRPS26Q9BYN8 205 aaKnown RBP15.43■□□□□ 0.06
SCARF1-203ENST00000434376 CERS4Q9HA82 394 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 SORCS3Q9UPU3 1222 aa15.43■□□□□ 0.06
SCARF1-203ENST00000434376 A0A1B0GVM2 712 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 CACNG3O60359 315 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 UGT2B4P06133 528 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 HMGA1P17096 107 aaKnown RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 YBEYP58557 167 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 IKBKEQ14164 716 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 NR6A1Q15406 480 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 ANKS6Q68DC2 871 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 ADGRG6Q86SQ4 1221 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 RETREG3Q86VR2 466 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 ADGRG2Q8IZP9 1017 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 HMGCLL1Q8TB92 370 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 TDRD1Q9BXT4 1180 aaKnown RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 SQORQ9Y6N5 450 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 GREB1Q4ZG55 1949 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 LOC285095A0A1B0GVY8 99 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 TEX28O15482 410 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 NRP2O60462 931 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 SYNCRIPO60506 623 aaKnown RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 PENKP01210 267 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 PKMP14618 531 aaKnown RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 IMPDH1P20839 514 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 PBLDP30039 288 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 UFM1P61960 85 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 NTHL1P78549 312 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 ADGRE1Q14246 886 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 GRM2Q14416 872 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 OGFRL1Q5TC84 451 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 KLHL35Q6PF15 583 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 ZNF786Q8N393 782 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 ZNF513Q8N8E2 541 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 FOXJ1Q92949 421 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 CNDP1Q96KN2 507 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 ZFRQ96KR1 1074 aaKnown RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 PLEKHG4BQ96PX9 1271 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 AARSD1Q9BTE6 412 aaKnown RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 ABCB8Q9NUT2 735 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 CACNA2D2Q9NY47 1150 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 CCL26Q9Y258 94 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 NYNRINQ9P2P1 1898 aaKnown RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 CLDN11O75508 207 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 IGHA2P01877 340 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 ATXN8OSP0DMR3 200 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 CDH4P55283 916 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 NAA20P61599 178 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 PLOD1Q02809 727 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 CPSF6Q16630 551 aaKnown RBP eCLIP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 AFMIDQ63HM1 303 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 CNTN4Q8IWV2 1026 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 PSKH2Q96QS6 385 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 PFDN4Q9NQP4 134 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 C6orf203Q9P0P8 240 aaPredicted RBP15.42■□□□□ 0.06
SCARF1-203ENST00000434376 VTI1BQ9UEU0 232 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 STK39Q9UEW8 545 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 CROTQ9UKG9 612 aa15.42■□□□□ 0.06
SCARF1-203ENST00000434376 BRWD1Q9NSI6 2320 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 MROH6A6NGR9 719 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 SLC25A14O95258 325 aaPredicted RBP15.41■□□□□ 0.06
SCARF1-203ENST00000434376 MTHFD2P13995 350 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 AKT1P31749 480 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 CD70P32970 193 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 ENTPD1P49961 510 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 IL2P60568 153 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 NFYCQ13952 458 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 RNF175Q8N4F7 328 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 STAG3L4Q8TBR4 150 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 RDH11Q8TC12 318 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 LKAAEAR1Q8TD35 194 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 CANT1Q8WVQ1 401 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 GAB3Q8WWW8 586 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 ISL2Q96A47 359 aa15.41■□□□□ 0.06
SCARF1-203ENST00000434376 UBXN10Q96LJ8 280 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms