RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ASB8Q9H765 288 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 LRRC40Q9H9A6 602 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TRIM39Q9HCM9 518 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TIMMDC1Q9NPL8 285 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 RAD18Q9NS91 495 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 HACD3Q9P035 362 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TAAR2Q9P1P5 351 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ANGPTL2Q9UKU9 493 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TMPRSS11EQ9UL52 423 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 TTC7AQ9ULT0 858 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 SLC17A4Q9Y2C5 497 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 DNAJC16Q9Y2G8 782 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 PKP3Q9Y446 797 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ST14Q9Y5Y6 855 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 DGKBQ9Y6T7 804 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 U3KQA8 63 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 CACNA1EQ15878 2313 aa5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZFC3H1O60293 1989 aaKnown RBP5.71□□□□□ -1.5
HMGB3P24-201ENST00000433260 EME2A4GXA9 379 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 OR2AG2A6NM03 316 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 LDB2O43679 373 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 NUAK1O60285 661 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 OPA1O60313 960 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF189O75820 626 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 SRP72O76094 671 aaKnown RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 ECEL1O95672 775 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 AP2A1O95782 977 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 EML2O95834 649 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 MT-CO3P00414 261 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 IVLP07476 585 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 PRSS56P0CW18 603 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 TEAD1P28347 426 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 ALDH4A1P30038 563 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 MC4RP32245 332 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 FDFT1P37268 417 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 COILP38432 576 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 CDKN1CP49918 316 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 MAZP56270 477 aaKnown RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 SESN2P58004 480 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 CCL7P80098 99 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 E2F1Q01094 437 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 INSM1Q01101 510 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 CDH17Q12864 832 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 TARDBPQ13148 414 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 SEPT7Q16181 437 aaKnown RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 KHDC1Q4VXA5 237 aaKnown RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 C4orf17Q53FE4 359 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZRANB3Q5FWF4 1079 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 FOXR1Q6PIV2 292 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 CCDC137Q6PK04 289 aaKnown RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 OGFOD3Q6PK18 319 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 LVRNQ6Q4G3 990 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 TMEM220Q6QAJ8 160 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 DET1Q7L5Y6 550 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 TAS2R42Q7RTR8 314 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 TMPRSS7Q7RTY8 843 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 LINC00523Q86TU6 105 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 GALNT13Q8IUC8 556 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 KLHL7Q8IXQ5 586 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 RASGEF1CQ8N431 466 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 ARL14Q8N4G2 192 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 BEND7Q8N7W2 519 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 RASGEF1AQ8N9B8 481 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 FAM181AQ8N9Y4 354 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 KYQ8NBH2 561 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZDHHC1Q8WTX9 485 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 CCDC74AQ96AQ1 378 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 CNTNAP3BQ96NU0 1288 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 PPP1R2P1Q96PQ5 205 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 PLEKHG4BQ96PX9 1271 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 OR2M4Q96R27 311 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 CCDC3Q9BQI4 270 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 CNTNAP3Q9BZ76 1288 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 CDH19Q9H159 772 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 OSGEPL1Q9H4B0 414 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 ARNT2Q9HBZ2 717 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 NEUROD4Q9HD90 331 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 PRDM8Q9NQV8 689 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 HOMER3Q9NSC5 361 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 KLC4Q9NSK0 619 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 TRNAU1APQ9NX07 287 aaKnown RBP5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 PAK5Q9P286 719 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 LRIT1Q9P2V4 623 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 FAM8A1Q9UBU6 413 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 SLC23A2Q9UGH3 650 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 CRLS1Q9UJA2 301 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 SNX12Q9UMY4 172 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 WASF3Q9UPY6 502 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 KCNK6Q9Y257 313 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 RNF215Q9Y6U7 377 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 KNL1Q8NG31 2342 aa5.7□□□□□ -1.5
HMGB3P24-201ENST00000433260 DMDP11532 3685 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 ARID1BQ8NFD5 2236 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 TCRBV7S3A2A0A539 114 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 TRABD2BA6NFA1 517 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 OR51F1A6NGY5 319 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 RHPN2P1A8MT19 583 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 PGRMC1O00264 195 aaKnown RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 PPM1DO15297 605 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms