RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 PCDHB1Q9Y5F3 818 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 OAS3Q9Y6K5 1087 aaKnown RBP10.88□□□□□ -0.67
CHD4-202ENST00000430771 PCDH15Q96QU1 1955 aa10.88□□□□□ -0.67
CHD4-202ENST00000430771 WDFY4Q6ZS81 3184 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 MUC6Q6W4X9 2439 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 A0A1B0GVT2 93 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 EXOC1LA0A1B0GW35 172 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 TMEM202A6NGA9 273 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 H3BMM5 538 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 NUAK1O60285 661 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 LRP3O75074 770 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 CDK14O94921 469 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 CER1O95813 267 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 ESR1P03372 595 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 GSTM1P09488 218 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 OR56A5P0C7T3 313 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 ATP1B2P14415 290 aaPredicted RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 NME1P15531 152 aaKnown RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 VCLP18206 1134 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 GP5P40197 560 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 CTSKP43235 329 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 LEPRP48357 1165 aaKnown RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 PRLHRP49683 370 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 CSE1LP55060 971 aaKnown RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 ADARP55265 1226 aaKnown RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 EIF3BP55884 814 aaKnown RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 SRP54P61011 504 aaKnown RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 GSTM4Q03013 218 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 PPARDQ03181 441 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 TMEM115Q12893 351 aaPredicted RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 GRIK2Q13002 908 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 CTBP1Q13363 440 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 FZD2Q14332 565 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 BCL7AQ4VC05 210 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 TEDDM1Q5T9Z0 273 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 ADGRG6Q86SQ4 1221 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 LDB1Q86U70 411 aaPredicted RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 LRRTM4Q86VH4 590 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 PHACTR4Q8IZ21 702 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 PPM1NQ8N819 430 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 LPGAT1Q92604 370 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 PANX3Q96QZ0 392 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 CCDC77Q9BR77 488 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 ERVMER34-1Q9H9K5 563 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 CARS2Q9HA77 564 aaKnown RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 PPCSQ9HAB8 311 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 CAPN10Q9HC96 672 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 ARFGAP3Q9NP61 516 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 FBXO6Q9NRD1 293 aaPredicted RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 ATXN10Q9UBB4 475 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 APOBEC3BQ9UH17 382 aaKnown RBP10.87□□□□□ -0.67
CHD4-202ENST00000430771 ANKRD6Q9Y2G4 727 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 COMMD10Q9Y6G5 202 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 IKBKGQ9Y6K9 419 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 DGKBQ9Y6T7 804 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 TMEM131Q92545 1883 aa10.87□□□□□ -0.67
CHD4-202ENST00000430771 KLHL33A6NCF5 533 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 KHNYNO15037 678 aaKnown RBP10.86□□□□□ -0.67
CHD4-202ENST00000430771 CHUKO15111 745 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 GRID2O43424 1007 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 DFNA5O60443 496 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 DNAJC6O75061 913 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 TNFP01375 233 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 FTH1P02794 183 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 CEACAM5P06731 702 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 INHBAP08476 426 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 ZNF8P17098 575 aaPredicted RBP10.86□□□□□ -0.67
CHD4-202ENST00000430771 CA5AP35218 305 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 GNPDA1P46926 289 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 ARRB1P49407 418 aaPredicted RBP10.86□□□□□ -0.67
CHD4-202ENST00000430771 ATXN3P54252 364 aaPredicted RBP10.86□□□□□ -0.67
CHD4-202ENST00000430771 HNRNPKP61978 463 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHD4-202ENST00000430771 B4GALNT1Q00973 533 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 LRP8Q14114 963 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 EFTUD2Q15029 972 aaKnown RBP eCLIP10.86□□□□□ -0.671e-13■■■□□ 15.8
CHD4-202ENST00000430771 INSCQ1MX18 579 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 ALG11Q2TAA5 492 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 KIF19Q2TAC6 998 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 KHDC1Q4VXA5 237 aaKnown RBP10.86□□□□□ -0.67
CHD4-202ENST00000430771 PLA2G2CQ5R387 149 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 TPRG1LQ5T0D9 272 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 ZNF648Q5T619 568 aaPredicted RBP10.86□□□□□ -0.67
CHD4-202ENST00000430771 PTRHD1Q6GMV3 140 aaKnown RBP10.86□□□□□ -0.67
CHD4-202ENST00000430771 CRTC3Q6UUV7 619 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 MICALCLQ6ZW33 695 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 DET1Q7L5Y6 550 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 STRA8Q7Z7C7 330 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 SPATS2Q86XZ4 545 aaKnown RBP10.86□□□□□ -0.67
CHD4-202ENST00000430771 HID1Q8IV36 788 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 OR1E3Q8WZA6 343 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 SCARF2Q96GP6 870 aaPredicted RBP10.86□□□□□ -0.67
CHD4-202ENST00000430771 TIMM29Q9BSF4 260 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 BOCQ9BWV1 1114 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 SLC13A1Q9BZW2 595 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 RHOJQ9H4E5 214 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 CYP4F12Q9HCS2 524 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 DNAJC28Q9NX36 388 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 SLC17A6Q9P2U8 582 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 FETUBQ9UGM5 382 aa10.86□□□□□ -0.67
CHD4-202ENST00000430771 RABGEF1Q9UJ41 708 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms