RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 KDM7AQ6ZMT4 941 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 C11orf74Q86VG3 221 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 CYP4X1Q8N118 509 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 DEFB119Q8N690 84 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 CLDN19Q8N6F1 224 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 MZB1Q8WU39 189 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 GAB3Q8WWW8 586 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 NELL1Q92832 810 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 FUBP1Q96AE4 644 aaKnown RBP16.87■□□□□ 0.29
LINC00887-203ENST00000429578 BMFQ96LC9 184 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 SH3GL2Q99962 352 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 APOOQ9BUR5 198 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 LGR4Q9BXB1 951 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 DUSP15Q9H1R2 295 aaPredicted RBP16.87■□□□□ 0.29
LINC00887-203ENST00000429578 CCDC68Q9H2F9 335 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 CENPHQ9H3R5 247 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 TMBIM4Q9HC24 238 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 PHPT1Q9NRX4 125 aaPredicted RBP16.87■□□□□ 0.29
LINC00887-203ENST00000429578 COMMD10Q9Y6G5 202 aa16.87■□□□□ 0.29
LINC00887-203ENST00000429578 TRIM49D1C9J1S8 452 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 MYCLP1P12525 358 aaPredicted RBP16.86■□□□□ 0.29
LINC00887-203ENST00000429578 ATP1B2P14415 290 aaPredicted RBP16.86■□□□□ 0.29
LINC00887-203ENST00000429578 PKMP14618 531 aaKnown RBP16.86■□□□□ 0.29
LINC00887-203ENST00000429578 CD27P26842 260 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 POLD2P49005 469 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 CLDN2P57739 230 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 DNAJC3Q13217 504 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 RBM20Q5T481 1227 aaKnown RBP16.86■□□□□ 0.29
LINC00887-203ENST00000429578 GCNT7Q6ZNI0 430 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 TRIM74Q86UV6 250 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 SLC41A1Q8IVJ1 513 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 DCLK2Q8N568 766 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 GPATCH11Q8N954 259 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 SNX19Q92543 992 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 SERAC1Q96JX3 654 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 NDNQ99608 321 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 ZCCHC2Q9C0B9 1178 aaKnown RBP16.86■□□□□ 0.29
LINC00887-203ENST00000429578 GNPTGQ9UJJ9 305 aa16.86■□□□□ 0.29
LINC00887-203ENST00000429578 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 H0Y8X5 98 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 TOR1BO14657 336 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 VEGFDO43915 354 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 HOXC4P09017 264 aaPredicted RBP16.85■□□□□ 0.29
LINC00887-203ENST00000429578 KRT15P19012 456 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 PI4KAP42356 2102 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 PFN3P60673 137 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 POU4F1Q01851 419 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 TNFAIP8L3Q5GJ75 292 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 CTSL3PQ5NE16 218 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 ZNF648Q5T619 568 aaPredicted RBP16.85■□□□□ 0.29
LINC00887-203ENST00000429578 FAM45BPQ6NSW5 357 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 MACC1Q6ZN28 852 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 ADGRG6Q86SQ4 1221 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 TMEFF1Q8IYR6 380 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 GOLGA6L1Q8N7Z2 621 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 ACVR1CQ8NER5 493 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 FAM45AQ8TCE6 357 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 HSPA12BQ96MM6 686 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 AARSD1Q9BTE6 412 aaKnown RBP16.85■□□□□ 0.29
LINC00887-203ENST00000429578 CA5BQ9Y2D0 317 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 VWA7Q9Y334 891 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 PCDHGA2Q9Y5H1 932 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 OAS3Q9Y6K5 1087 aaKnown RBP16.85■□□□□ 0.29
LINC00887-203ENST00000429578 PRSS21Q9Y6M0 314 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 SDK1Q7Z5N4 2213 aa16.85■□□□□ 0.29
LINC00887-203ENST00000429578 MEI4A8MW99 385 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 H3BMM5 538 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 CACNB4O00305 520 aaPredicted RBP16.84■□□□□ 0.29
LINC00887-203ENST00000429578 CDK14O94921 469 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 ATP5DP30049 168 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 YPEL5P62699 121 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 HECTD2Q5U5R9 776 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 PTRHD1Q6GMV3 140 aaKnown RBP16.84■□□□□ 0.29
LINC00887-203ENST00000429578 KYAT3Q6YP21 454 aaKnown RBP16.84■□□□□ 0.29
LINC00887-203ENST00000429578 LPCAT2Q7L5N7 544 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 ABI3BPQ7Z7G0 1075 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 RASGEF1AQ8N9B8 481 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 FAM174AQ8TBP5 190 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 ELMO2Q96JJ3 720 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 STMN4Q9H169 189 aaPredicted RBP16.84■□□□□ 0.29
LINC00887-203ENST00000429578 ZSCAN32Q9NX65 697 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 ATXN10Q9UBB4 475 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 EIF2B4Q9UI10 523 aaKnown RBP16.84■□□□□ 0.29
LINC00887-203ENST00000429578 SLC39A10Q9ULF5 831 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 TDRD6O60522 2096 aaKnown RBP16.84■□□□□ 0.29
LINC00887-203ENST00000429578 A6NNZ2 444 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 QSOX1O00391 747 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 AP2A2O94973 939 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 ASMTLO95671 621 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 ALDOAP04075 364 aaKnown RBP16.84■□□□□ 0.29
LINC00887-203ENST00000429578 OR56A5P0C7T3 313 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 CD9P21926 228 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 CNR2P34972 360 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 KIAA1024LP59773 190 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 USP10Q14694 798 aaKnown RBP16.84■□□□□ 0.29
LINC00887-203ENST00000429578 TIFABQ6ZNK6 161 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 DET1Q7L5Y6 550 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 NAT14Q8WUY8 206 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 DNASE2BQ8WZ79 361 aa16.84■□□□□ 0.29
LINC00887-203ENST00000429578 KCNJ9Q92806 393 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms