RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 PPP2R2CQ9Y2T4 447 aa17.84■□□□□ 0.45
SSR4P1-202ENST00000429427 PKP3Q9Y446 797 aa17.84■□□□□ 0.45
SSR4P1-202ENST00000429427 SMG1Q96Q15 3661 aaKnown RBP17.84■□□□□ 0.45
SSR4P1-202ENST00000429427 MGAQ8IWI9 3026 aa17.83■□□□□ 0.45
SSR4P1-202ENST00000429427 AGRPO00253 132 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 STX7O15400 261 aaKnown RBP17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 PPFIA2O75334 1257 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 PRAMEF1O95521 474 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 CPNE6O95741 557 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 F3P13726 295 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 BRAFP15056 766 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 ZNF7P17097 686 aaPredicted RBP17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 LPOP22079 712 aaPredicted RBP17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 PEX6Q13608 980 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 KCTD19Q17RG1 926 aaPredicted RBP17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 SEL1L2Q5TEA6 688 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 ZDHHC20Q5W0Z9 365 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 FOXR1Q6PIV2 292 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 XKR5Q6UX68 686 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 LRRTM4Q86VH4 590 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 BRSK1Q8TDC3 778 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 ZNF578Q96N58 590 aaPredicted RBP17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 TIMM29Q9BSF4 260 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 DNAJC16Q9Y2G8 782 aa17.83■□□□□ 0.44
SSR4P1-202ENST00000429427 PLD2O14939 933 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 KMOO15229 486 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 ZNF189O75820 626 aaPredicted RBP17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 TNFSF15O95150 251 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 AP2A1O95782 977 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 ETS1P14921 441 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 TPH1P17752 444 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 ERVPABLB-1P60509 514 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 UBE2IP63279 158 aaKnown RBP17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 SQSTM1Q13501 440 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 C16orf72Q14CZ0 275 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 MAP9Q49MG5 647 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 RAB11FIP2Q7L804 512 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 CLEC14AQ86T13 490 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 LSMEM2Q8N112 164 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 TMEM74Q96NL1 305 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 OSGEPL1Q9H4B0 414 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 SARS2Q9NP81 518 aaKnown RBP17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 LHX6Q9UPM6 363 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 AHCTF1Q8WYP5 2266 aa17.82■□□□□ 0.44
SSR4P1-202ENST00000429427 PRAMEF33A0A0G2JMD5 474 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 IGHV5-10-1A0A0J9YXX1 117 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 C2orf81A6NN90 581 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 AGAP14A8MT82 685 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 SGTAO43765 313 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 SRP72O76094 671 aaKnown RBP17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 ITIH1P19827 911 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 ETV5P41161 510 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 TMPRSS15P98073 1019 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 HHEXQ03014 270 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 CCDC173Q0VFZ6 552 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 NFATC2Q13469 925 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 SNX1Q13596 522 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 SEPT7Q16181 437 aaKnown RBP17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 INSCQ1MX18 579 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 P3H1Q32P28 736 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 FAM83HQ6ZRV2 1179 aaPredicted RBP17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 TRAPPC5Q8IUR0 188 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 SPACA3Q8IXA5 215 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 RCBTB1Q8NDN9 531 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 GDAP1Q8TB36 358 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 ZNF398Q8TD17 642 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 NAF1Q96HR8 494 aaKnown RBP17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 DNAJC1Q96KC8 554 aaKnown RBP17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 PPP1R2P1Q96PQ5 205 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 LRRC40Q9H9A6 602 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 KCNK4Q9NYG8 393 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 ZNF624Q9P2J8 865 aaPredicted RBP17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 CPNE7Q9UBL6 633 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 WDR37Q9Y2I8 494 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 LOXL2Q9Y4K0 774 aa17.81■□□□□ 0.44
SSR4P1-202ENST00000429427 KIR2DS5A0A0G2JLQ3 304 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 A0A0G2JNG1 304 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 KIR2DS3K7RE56 304 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 ITGA2BP08514 1039 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 PRSS56P0CW18 603 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 MPSTP25325 297 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 RPL10P27635 214 aaKnown RBP17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 GRIA1P42261 906 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 DRG2P55039 364 aaKnown RBP17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 PCBP4P57723 403 aaKnown RBP17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 TLE3Q04726 772 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 ITGA9Q13797 1035 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 KIR2DS5Q14953 304 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 LDLRAP1Q5SW96 308 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 PHF19Q5T6S3 580 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 PIM3Q86V86 326 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 FBXO39Q8N4B4 442 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 BEND7Q8N7W2 519 aaPredicted RBP17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 UBE2Q2Q8WVN8 375 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 CCDC74BQ96LY2 380 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 ALS2CR12Q96Q35 445 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 FRMD8P1Q9BZ68 369 aaPredicted RBP17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 STRADBQ9C0K7 418 aa17.8■□□□□ 0.44
SSR4P1-202ENST00000429427 KCNF1Q9H3M0 494 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms