RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 FAM136AQ96C01 138 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 TSPAN17Q96FV3 270 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 COX14Q96I36 57 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 GPR22Q99680 433 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 APOOQ9BUR5 198 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 TMEM109Q9BVC6 243 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 TSSK1BQ9BXA7 367 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 LGR4Q9BXB1 951 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 C1QTNF1Q9BXJ1 281 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 ROPN1BQ9BZX4 212 aaPredicted RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 STMN4Q9H169 189 aaPredicted RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 DUSP15Q9H1R2 295 aaPredicted RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 ROPN1Q9HAT0 212 aaPredicted RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 TRIM39Q9HCM9 518 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 SARS2Q9NP81 518 aaKnown RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 FAM8A1Q9UBU6 413 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 MOSPD1Q9UJG1 213 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 CNOT6Q9ULM6 557 aaKnown RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 CORO1CQ9ULV4 474 aaPredicted RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 PCDHB1Q9Y5F3 818 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 PCDHGA2Q9Y5H1 932 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 OAS3Q9Y6K5 1087 aaKnown RBP7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 SLCO1B1Q9Y6L6 691 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 ATG2BQ96BY7 2078 aa7.82□□□□□ -1.16
HMGA1P4-201ENST00000428643 H3BMM5 538 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 TOR1BO14657 336 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 TPP1O14773 563 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 HRO43593 1189 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 OPA1O60313 960 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 VPS26AO75436 327 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 CDK14O94921 469 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 AP2A2O94973 939 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 TRIM16O95361 564 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 FTH1P02794 183 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 MT-ND3P03897 115 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 SNRPAP09012 282 aaKnown RBP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 OR56A5P0C7T3 313 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 THEGLP0DJG4 465 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ATP1B2P14415 290 aaPredicted RBP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF8P17098 575 aaPredicted RBP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ITGB6P18564 788 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 CHRM3P20309 590 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 RPS3P23396 243 aaKnown RBP eCLIP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ITPKAP23677 461 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ATP5DP30049 168 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 CNR2P34972 360 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 TRIM23P36406 574 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 POLD2P49005 469 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 CTSCP53634 463 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ADARP55265 1226 aaKnown RBP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 C21orf59P57076 290 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 PFN3P60673 137 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 BOP1Q14137 746 aaKnown RBP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 SIM2Q14190 667 aaPredicted RBP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 RASA2Q15283 850 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 PLK5Q496M5 336 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 SYTL3Q4VX76 610 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 TAF1BQ53T94 588 aaPredicted RBP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 CTSL3PQ5NE16 218 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 HECTD2Q5U5R9 776 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 FAM45BPQ6NSW5 357 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF549Q6P9A3 640 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ADGRD1Q6QNK2 874 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 MACC1Q6ZN28 852 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 RAPH1Q70E73 1250 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ABI3BPQ7Z7G0 1075 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 CMC1Q7Z7K0 106 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 PIM3Q86V86 326 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 GALNT13Q8IUC8 556 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 KRT222Q8N1A0 295 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ACVR1CQ8NER5 493 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 FAM45AQ8TCE6 357 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 MTBPQ96DY7 904 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 SGF29Q96ES7 293 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 KLHDC7BQ96G42 594 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ZNF514Q96K75 400 aaPredicted RBP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 WDR92Q96MX6 357 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 PANX3Q96QZ0 392 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ORAI3Q9BRQ5 295 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 AARSD1Q9BTE6 412 aaKnown RBP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 P2RY12Q9H244 342 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 CAB39LQ9H9S4 337 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 FGF22Q9HCT0 170 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 TM9SF3Q9HD45 589 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 SNX15Q9NRS6 342 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 ATXN10Q9UBB4 475 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 KLQ9UEF7 1012 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 LGALS13Q9UHV8 139 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 TRMT6Q9UJA5 497 aaKnown RBP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 MTO1Q9Y2Z2 717 aaKnown RBP7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 HS3ST3A1Q9Y663 406 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 COMMD10Q9Y6G5 202 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 PRSS21Q9Y6M0 314 aa7.81□□□□□ -1.16
HMGA1P4-201ENST00000428643 HMX2A2RU54 273 aa7.8□□□□□ -1.16
HMGA1P4-201ENST00000428643 TMEM202A6NGA9 273 aa7.8□□□□□ -1.16
HMGA1P4-201ENST00000428643 IQCF5A8MTL0 148 aa7.8□□□□□ -1.16
HMGA1P4-201ENST00000428643 GPR89AB7ZAQ6 455 aa7.8□□□□□ -1.16
HMGA1P4-201ENST00000428643 QSOX1O00391 747 aa7.8□□□□□ -1.16
HMGA1P4-201ENST00000428643 MAP2K7O14733 419 aa7.8□□□□□ -1.16
HMGA1P4-201ENST00000428643 SCAMP1O15126 338 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms