RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PLXNA3P51805 1871 aa15.08■□□□□ 0.01
C9orf3-204ENST00000424143 PPP6CO00743 305 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 MRPS14O60783 128 aaKnown RBP15.08■□□□□ 0
C9orf3-204ENST00000424143 ECI2O75521 394 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 FUCA1P04066 466 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 CHRM3P20309 590 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 POLR2IP36954 125 aaKnown RBP15.08■□□□□ 0
C9orf3-204ENST00000424143 CPT1AP50416 773 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 TSPY1Q01534 308 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 CHRNB3Q05901 458 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 TRAF2Q12933 501 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 RFX4Q33E94 735 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 SETMARQ53H47 684 aaPredicted RBP15.08■□□□□ 0
C9orf3-204ENST00000424143 C6orf136Q5SQH8 315 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 PIK3R6Q5UE93 754 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 TBPL2Q6SJ96 375 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 SPARTQ8N0X7 666 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 FBLIM1Q8WUP2 373 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 FKBP10Q96AY3 582 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 ZNF641Q96N77 438 aaPredicted RBP15.08■□□□□ 0
C9orf3-204ENST00000424143 NSUN5Q96P11 429 aaKnown RBP15.08■□□□□ 0
C9orf3-204ENST00000424143 NEURL2Q9BR09 285 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 MROQ9BYG7 248 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 WDR12Q9GZL7 423 aaKnown RBP15.08■□□□□ 0
C9orf3-204ENST00000424143 POLR1EQ9GZS1 481 aaKnown RBP15.08■□□□□ 0
C9orf3-204ENST00000424143 FANCEQ9HB96 536 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 MIOSQ9NXC5 875 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 SMPD4Q9NXE4 827 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 CRYL1Q9Y2S2 319 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 ZNF711Q9Y462 761 aa15.08■□□□□ 0
C9orf3-204ENST00000424143 SUPT3HB4E1H0 165 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 SUPT3HO75486 399 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 CCDC159P0C7I6 412 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 CDH3P22223 829 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 GJA5P36382 358 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 MAPKAPK2P49137 400 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 RPS3AP61247 264 aaKnown RBP15.07■□□□□ 0
C9orf3-204ENST00000424143 UFM1P61960 85 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 MRPS6P82932 125 aaKnown RBP15.07■□□□□ 0
C9orf3-204ENST00000424143 NR1D2Q14995 579 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 ACOX1Q15067 660 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 NEDD8Q15843 81 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 C6orf141Q5SZD1 244 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 AFTPHQ6ULP2 937 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 GPRIN3Q6ZVF9 776 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 PLEKHH3Q7Z736 793 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 SYVN1Q86TM6 617 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 ZC3H7AQ8IWR0 971 aaKnown RBP15.07■□□□□ 0
C9orf3-204ENST00000424143 DNAJB8Q8NHS0 232 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 PROKR1Q8TCW9 393 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 FUBP1Q96AE4 644 aaKnown RBP15.07■□□□□ 0
C9orf3-204ENST00000424143 TBC1D20Q96BZ9 403 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 KCNA7Q96RP8 456 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 CGREF1Q99674 301 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 PSD2Q9BQI7 771 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 NAA50Q9GZZ1 169 aaKnown RBP15.07■□□□□ 0
C9orf3-204ENST00000424143 ING2Q9H160 280 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 MAGIXQ9H6Y5 334 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 TMLHEQ9NVH6 421 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 MPP6Q9NZW5 540 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 ENPP5Q9UJA9 477 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 TDRKHQ9Y2W6 561 aaKnown RBP15.07■□□□□ 0
C9orf3-204ENST00000424143 PTGDR2Q9Y5Y4 395 aa15.07■□□□□ 0
C9orf3-204ENST00000424143 TRIP12Q14669 1992 aaPredicted RBP15.07■□□□□ 0
C9orf3-204ENST00000424143 ARL5CA6NH57 179 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 CLDN25C9JDP6 229 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 J3KR12 359 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 M0QX08 132 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 PFDN6O15212 129 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 TBC1D4O60343 1298 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 GMNNO75496 209 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SCELO95171 688 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 NDST3O95803 873 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 CLIC3O95833 236 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 ALOX5P09917 674 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 ZNF182P17025 639 aaPredicted RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 MSH3P20585 1137 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 JAK1P23458 1154 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SHMT2P34897 504 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 RYKP34925 604 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 OR4D2P58180 307 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 YBX1P67809 324 aaKnown RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 PPP2R2BQ00005 443 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 ITKQ08881 620 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SERINC3Q13530 473 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 OXA1LQ15070 435 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 CD300LGQ6UXG3 332 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 DLK2Q6UY11 383 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 KDELC2Q7Z4H8 507 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 LDB1Q86U70 411 aaPredicted RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 ZDHHC13Q8IUH4 622 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 PARP8Q8N3A8 854 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SLC15A4Q8N697 577 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 ZNF513Q8N8E2 541 aaPredicted RBP15.06■□□□□ 0
C9orf3-204ENST00000424143 ATP6V0D2Q8N8Y2 350 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 ZNF555Q8NEP9 628 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SCAMP5Q8TAC9 235 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 ITFG1Q8TB96 612 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SH3RF2Q8TEC5 729 aa15.06■□□□□ 0
C9orf3-204ENST00000424143 SLC22A17Q8WUG5 538 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms