RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 TAS2R40P59535 323 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 CEBPZQ03701 1054 aaKnown RBP3.73□□□□□ -1.81
LINC00397-201ENST00000422074 NIPAL4Q0D2K0 466 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 PDE1CQ14123 709 aaPredicted RBP3.73□□□□□ -1.81
LINC00397-201ENST00000422074 ZC2HC1CQ53FD0 456 aaPredicted RBP3.73□□□□□ -1.81
LINC00397-201ENST00000422074 ALFQ53S48 1182 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 TRPT1Q86TN4 253 aaKnown RBP3.73□□□□□ -1.81
LINC00397-201ENST00000422074 PM20D2Q8IYS1 436 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 STPG4Q8N801 248 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 HM13Q8TCT9 377 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 UTP15Q8TED0 518 aaKnown RBP3.73□□□□□ -1.81
LINC00397-201ENST00000422074 TRPC4APQ8TEL6 797 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 FCAMRQ8WWV6 532 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 SMARCE1Q969G3 411 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 STAMBPL1Q96FJ0 436 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 ZNF354BQ96LW1 612 aa3.73□□□□□ -1.81
LINC00397-201ENST00000422074 ZBTB20Q9HC78 741 aaPredicted RBP3.73□□□□□ -1.81
LINC00397-201ENST00000422074 TRMT1Q9NXH9 659 aaKnown RBP3.73□□□□□ -1.81
LINC00397-201ENST00000422074 MAP3K20Q9NYL2 800 aaKnown RBP3.73□□□□□ -1.81
LINC00397-201ENST00000422074 H0YIN7 160 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 MAP2K7O14733 419 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 ZNF883P0CG24 379 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 SELLP14151 372 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 MCCP23508 829 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 PAX3P23760 479 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 PSMA4P25789 261 aaKnown RBP3.72□□□□□ -1.81
LINC00397-201ENST00000422074 ACADLP28330 430 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 ALDH4A1P30038 563 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 PBX3P40426 434 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 HSD17B4P51659 736 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 CTSCP53634 463 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 CCDC70Q6NSX1 233 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 CYP20A1Q6UW02 462 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 MMS22LQ6ZRQ5 1243 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 ANO5Q75V66 913 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 ARHGAP12Q8IWW6 846 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 DIS3L2Q8IYB7 885 aaKnown RBP3.72□□□□□ -1.81
LINC00397-201ENST00000422074 RASGEF1CQ8N431 466 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 ETNPPLQ8TBG4 499 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 ASCL2Q99929 193 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 PDCL3Q9H2J4 239 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 PIGMQ9H3S5 423 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 POLR1BQ9H9Y6 1135 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 UPF2Q9HAU5 1272 aaKnown RBP3.72□□□□□ -1.81
LINC00397-201ENST00000422074 EPB41L5Q9HCM4 733 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 MMP24Q9Y5R2 645 aa3.72□□□□□ -1.81
LINC00397-201ENST00000422074 SCAMP1O15126 338 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 NDUFS3O75489 264 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 TSHBP01222 138 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 PRSS56P0CW18 603 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 GNB3P16520 340 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 CDH2P19022 906 aaPredicted RBP3.71□□□□□ -1.82
LINC00397-201ENST00000422074 TFAP4Q01664 338 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 CDC16Q13042 620 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 LRIF1Q5T3J3 769 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 FAM109BQ6ICB4 259 aaPredicted RBP3.71□□□□□ -1.82
LINC00397-201ENST00000422074 FAM53AQ6NSI3 398 aaPredicted RBP3.71□□□□□ -1.82
LINC00397-201ENST00000422074 PACS1Q6VY07 963 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 RBMS3Q6XE24 437 aaKnown RBP3.71□□□□□ -1.82
LINC00397-201ENST00000422074 SDCCAG8Q86SQ7 713 aaPredicted RBP3.71□□□□□ -1.82
LINC00397-201ENST00000422074 EMC1Q8N766 993 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 ADAD2Q8NCV1 583 aaKnown RBP3.71□□□□□ -1.82
LINC00397-201ENST00000422074 EGLN1Q9GZT9 426 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 ADPRHL2Q9NX46 363 aa3.71□□□□□ -1.82
LINC00397-201ENST00000422074 RCC2Q9P258 522 aaKnown RBP3.71□□□□□ -1.82
LINC00397-201ENST00000422074 RUSC2Q8N2Y8 1516 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 TMEM178BH3BS89 294 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 SMAD9O15198 467 aaKnown RBP3.7□□□□□ -1.82
LINC00397-201ENST00000422074 TFAP2AP05549 437 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 SPARCP09486 303 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 ATP1A3P13637 1013 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 MSH3P20585 1137 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 ZC2HC1BQ5TFG8 222 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 GLDNQ6ZMI3 551 aaPredicted RBP3.7□□□□□ -1.82
LINC00397-201ENST00000422074 SLC5A8Q8N695 610 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 PCYOX1LQ8NBM8 494 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 LRR1Q96L50 414 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 WDFY2Q96P53 400 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 SEC62Q99442 399 aaKnown RBP3.7□□□□□ -1.82
LINC00397-201ENST00000422074 GFI1Q99684 422 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 SEMA3CQ99985 751 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 SLX1AQ9BQ83 275 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 KCNE2Q9Y6J6 123 aa3.7□□□□□ -1.82
LINC00397-201ENST00000422074 DISP3Q9P2K9 1392 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 A0A1B0GU03 582 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 C15orf62A8K5M9 175 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 NR5A2O00482 541 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 SH3BP5O60239 455 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 ZNF500O60304 480 aaPredicted RBP3.69□□□□□ -1.82
LINC00397-201ENST00000422074 RTN3O95197 1032 aaPredicted RBP3.69□□□□□ -1.82
LINC00397-201ENST00000422074 CCNDBP1O95273 360 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 KCNK5O95279 499 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 AGR2O95994 175 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 HIST1H2ABP04908 130 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 EIF2S1P05198 315 aaKnown RBP3.69□□□□□ -1.82
LINC00397-201ENST00000422074 IGHV4-38-2P0DP08 117 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 HIST1H2ADP20671 130 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 HRH2P25021 359 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 CHRNB4P30926 498 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 CCR9P51686 369 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms