RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 NRROSQ86YC3 692 aa15.55■□□□□ 0.08
BRAT1-202ENST00000421712 SLC35F3Q8IY50 421 aa15.55■□□□□ 0.08
BRAT1-202ENST00000421712 NXPE1Q8N323 547 aa15.55■□□□□ 0.08
BRAT1-202ENST00000421712 OTUD6BQ8N6M0 293 aa15.55■□□□□ 0.08
BRAT1-202ENST00000421712 OR13J1Q8NGT2 312 aa15.55■□□□□ 0.08
BRAT1-202ENST00000421712 TTC1Q99614 292 aa15.55■□□□□ 0.08
BRAT1-202ENST00000421712 BOCQ9BWV1 1114 aa15.55■□□□□ 0.08
BRAT1-202ENST00000421712 KLC4Q9NSK0 619 aa15.55■□□□□ 0.08
BRAT1-202ENST00000421712 SPATS2LQ9NUQ6 558 aaKnown RBP15.55■□□□□ 0.08
BRAT1-202ENST00000421712 ANAPC5Q9UJX4 755 aa15.55■□□□□ 0.08
BRAT1-202ENST00000421712 PADI4Q9UM07 663 aa15.55■□□□□ 0.08
BRAT1-202ENST00000421712 MAD1L1Q9Y6D9 718 aa15.55■□□□□ 0.08
BRAT1-202ENST00000421712 TRBV23OR9-2A0A075B6M9 112 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 FAM187AA6NFU0 413 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 CHUKO15111 745 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 ZNF7P17097 686 aaPredicted RBP15.54■□□□□ 0.08
BRAT1-202ENST00000421712 VCLP18206 1134 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 ACRV1P26436 265 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 NMBRP28336 390 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 PBLDP30039 288 aaPredicted RBP15.54■□□□□ 0.08
BRAT1-202ENST00000421712 FOXC1Q12948 553 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 TUBB2AQ13885 445 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 WHAMMP3Q1A5X7 153 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 FASTKD1Q53R41 847 aaKnown RBP15.54■□□□□ 0.08
BRAT1-202ENST00000421712 FNBP1LQ5T0N5 605 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 ERMP1Q7Z2K6 904 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 EFL1Q7Z2Z2 1120 aaKnown RBP15.54■□□□□ 0.08
BRAT1-202ENST00000421712 MPP5Q8N3R9 675 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 KYQ8NBH2 561 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 OR4L1Q8NH43 312 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 HEXDCQ8WVB3 486 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 PEX13Q92968 403 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 SGF29Q96ES7 293 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 SNF8Q96H20 258 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 TUBB2BQ9BVA1 445 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 KIFC1Q9BW19 673 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 ZDHHC3Q9NYG2 299 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 SOX13Q9UN79 622 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 SNX24Q9Y343 169 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 DCHS1Q96JQ0 3298 aa15.54■□□□□ 0.08
BRAT1-202ENST00000421712 ARHGEF17Q96PE2 2063 aaPredicted RBP15.53■□□□□ 0.08
BRAT1-202ENST00000421712 COL5A1P20908 1838 aaPredicted RBP15.53■□□□□ 0.08
BRAT1-202ENST00000421712 MAGEB16A2A368 324 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 RAD51CO43502 376 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 RFPL3O75679 317 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 POP7O75817 140 aaKnown RBP15.53■□□□□ 0.08
BRAT1-202ENST00000421712 ATP1B2P14415 290 aaPredicted RBP15.53■□□□□ 0.08
BRAT1-202ENST00000421712 PAMP19021 973 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 ACP1P24666 158 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 PSMA3P25788 255 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 ACADVLP49748 655 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 ITGA8P53708 1063 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 MORF4L2Q15014 288 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 DNAJC21Q5F1R6 531 aaKnown RBP15.53■□□□□ 0.08
BRAT1-202ENST00000421712 LYPLAL1Q5VWZ2 237 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 GUSBP11Q6P575 273 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 HOOK3Q86VS8 718 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 AMZ2Q86W34 360 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 PIANPQ8IYJ0 282 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 IFI44Q8TCB0 444 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 NAT14Q8WUY8 206 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 MFSD3Q96ES6 412 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 ZNF514Q96K75 400 aaPredicted RBP15.53■□□□□ 0.08
BRAT1-202ENST00000421712 ABCG4Q9H172 646 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 MRM3Q9HC36 420 aaKnown RBP15.53■□□□□ 0.08
BRAT1-202ENST00000421712 CATSPERZQ9NTU4 200 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 TOR4AQ9NXH8 423 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 SLC23A2Q9UGH3 650 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 UTP11Q9Y3A2 253 aaKnown RBP15.53■□□□□ 0.08
BRAT1-202ENST00000421712 PCDHGA1Q9Y5H4 931 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 ST14Q9Y5Y6 855 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 PLXNB3Q9ULL4 1909 aa15.53■□□□□ 0.08
BRAT1-202ENST00000421712 ZNF106Q9H2Y7 1883 aaKnown RBP15.52■□□□□ 0.08
BRAT1-202ENST00000421712 EME2A4GXA9 379 aaPredicted RBP15.52■□□□□ 0.08
BRAT1-202ENST00000421712 AGAP14A8MT82 685 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 NDC80O14777 642 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 VAPBO95292 243 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 IVDP26440 423 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 PMLP29590 882 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 FOXN2P32314 431 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 PPARGP37231 505 aaPredicted RBP15.52■□□□□ 0.08
BRAT1-202ENST00000421712 CTSCP53634 463 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 ACVR1Q04771 509 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 ILKQ13418 452 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 SMAD1Q15797 465 aaKnown RBP15.52■□□□□ 0.08
BRAT1-202ENST00000421712 SEPT7Q16181 437 aaKnown RBP15.52■□□□□ 0.08
BRAT1-202ENST00000421712 DBN1Q16643 649 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 BBS9Q3SYG4 887 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 C14orf28Q4W4Y0 310 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 OGFOD3Q6PK18 319 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 DHRS13Q6UX07 377 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 ZNF547Q8IVP9 402 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 SFTPA2Q8IWL1 248 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 BEND7Q8N7W2 519 aaPredicted RBP15.52■□□□□ 0.08
BRAT1-202ENST00000421712 BBOF1Q8ND07 529 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 MNS1Q8NEH6 495 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 NAT6Q93015 286 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 ZNF669Q96BR6 464 aaPredicted RBP15.52■□□□□ 0.08
BRAT1-202ENST00000421712 TIMM29Q9BSF4 260 aa15.52■□□□□ 0.08
BRAT1-202ENST00000421712 DPH5Q9H2P9 285 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms