RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TMEM255BQ8WV15 326 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 PHF21AQ96BD5 680 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 SKA1Q96BD8 255 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 UHRF2Q96PU4 802 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 NAP1L4Q99733 375 aaKnown RBP4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 NEURL2Q9BR09 285 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 LRRC1Q9BTT6 524 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 FTOQ9C0B1 505 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 KAT14Q9H8E8 782 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 MBNL1Q9NR56 388 aaKnown RBP4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 TXLNGQ9NUQ3 528 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 UBA2Q9UBT2 640 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 FBXL17Q9UF56 701 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 FAF1Q9UNN5 650 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 KIAA1210Q9ULL0 1709 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 FAM172BPA6NC97 362 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 TMEM8BA6NDV4 472 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 LINC01565O15544 149 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 FGF17O60258 216 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 DOK2O60496 412 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 EIF5BO60841 1220 aaKnown RBP4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 CFC1BP0CG36 223 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 CFC1P0CG37 223 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 TCEA1P23193 301 aaKnown RBP4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 MSH2P43246 934 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 CAMPP49913 170 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 CDH8P55286 799 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 IRF3Q14653 427 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 GFI1BQ5VTD9 330 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 PLXDC2Q6UX71 529 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 ANO5Q75V66 913 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 CHST9Q7L1S5 443 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 SLC26A9Q7LBE3 791 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 PIWIL4Q7Z3Z4 852 aaKnown RBP4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 EMC1Q8N766 993 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 PPHLN1Q8NEY8 458 aaKnown RBP4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 OXNAD1Q96HP4 312 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 SEMA3CQ99985 751 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 SIL1Q9H173 461 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 ZNF334Q9HCZ1 680 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 TCP11L1Q9NUJ3 509 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 MTMR6Q9Y217 621 aa4.23□□□□□ -1.73
HMGB1P49-201ENST00000418882 MYO1GB0I1T2 1018 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 KRT86O43790 486 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 TPPPO94811 219 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 IGHV4-39P01824 125 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 AHRP35869 848 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 DCTP40126 519 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 GEMIN4P57678 1058 aaKnown RBP4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 CD81P60033 236 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 EEF1A1P68104 462 aaKnown RBP4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 IKQ13123 557 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 KRT81Q14533 505 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 ZSCAN23Q3MJ62 389 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 ACCSLQ4AC99 568 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 EEF1A1P5Q5VTE0 462 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 SARM1Q6SZW1 724 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 EPHX4Q8IUS5 362 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 KLHDC8BQ8IXV7 354 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 TTC39CQ8N584 583 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 KLHDC9Q8NEP7 349 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 SCFD2Q8WU76 684 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 NR4A3Q92570 626 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 SH2D4AQ9H788 454 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 TRPC7Q9HCX4 862 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 OGFRQ9NZT2 677 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 LYVE1Q9Y5Y7 322 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 SESN1Q9Y6P5 492 aa4.22□□□□□ -1.73
HMGB1P49-201ENST00000418882 TMEM189-UBE2V1I3L0A0 370 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 J3QR06 171 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 PLK4O00444 970 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 SYNGR3O43761 229 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 HS6ST1O60243 411 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 CTSVO60911 334 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 GCNT3O95395 438 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 BAG4O95429 457 aaKnown RBP4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 TUBBP07437 444 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 CLTBP09497 229 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 PHEXP78562 749 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 TFAP4Q01664 338 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 DMP1Q13316 513 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 UBE2V1Q13404 147 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 MVPQ14764 893 aaKnown RBP4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 DLG2Q15700 870 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 RARS2Q5T160 578 aaKnown RBP4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 PDSS1Q5T2R2 415 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 ZNF449Q6P9G9 518 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 ZNF534Q76KX8 674 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 GALNT13Q8IUC8 556 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 GBGT1Q8N5D6 347 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 SLC5A8Q8N695 610 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 GCSAMQ8N6F7 178 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 SPATA3Q8NHX4 192 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 GSDMBQ8TAX9 411 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 EPYCQ99645 322 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 BARD1Q99728 777 aaKnown RBP4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 SLX1AQ9BQ83 275 aa4.21□□□□□ -1.74
HMGB1P49-201ENST00000418882 TMEM39BQ9GZU3 492 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms