RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 CCDC28AQ8IWP9 274 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 NLGN4XQ8N0W4 816 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 PARP16Q8N5Y8 322 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 LSMEM1Q8N8F7 131 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 CNIH3Q8TBE1 160 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 CLEC4CQ8WTT0 213 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 L3HYPDHQ96EM0 354 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 SPATA17Q96L03 361 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 CDHR5Q9HBB8 845 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 ITM2CQ9NQX7 267 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 C3orf18Q9UK00 162 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 PTGDR2Q9Y5Y4 395 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 CNTNAP1P78357 1384 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 MIA3Q5JRA6 1907 aa7.96□□□□□ -1.14
HMGXB4-202ENST00000418170 H3BMM5 538 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 PRMT5O14744 637 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC16A6O15403 523 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 EEDO75530 441 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 PRKD3O94806 890 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ANGPTL1O95841 491 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 RBP1P09455 135 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 MYCLP1P12525 358 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 JUNDP17535 347 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 DNAJB2P25686 324 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 UGT2B10P36537 528 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SNX16P57768 344 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 CHRNB3Q05901 458 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SOWAHAQ2M3V2 549 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SMU1Q2TAY7 513 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 YIF1BQ5BJH7 314 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF678Q5SXM1 525 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 CES5AQ6NT32 575 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 TXNDC11Q6PKC3 985 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM131BQ86XD5 332 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SVOPLQ8N434 492 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ESX1Q8N693 406 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 LSM14AQ8ND56 463 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ITFG1Q8TB96 612 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ASB2Q96Q27 587 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 LRRC3Q9BY71 257 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 PTPRHQ9HD43 1115 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 PLSCR3Q9NRY6 295 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 GIMAP4Q9NUV9 329 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 EXD2Q9NVH0 621 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 PAQR5Q9NXK6 330 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 DNAJB9Q9UBS3 223 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 POLR2AP24928 1970 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 A0A0G2JMZ2 1700 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 LRRC37A2A6NM11 1700 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 PIP5K1BO14986 540 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SNX4O95219 450 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 MMP10P09238 476 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 LTA4HP09960 611 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 CPB1P15086 417 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ALOX12P18054 663 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 LBPP18428 481 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 TGFBR2P37173 567 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC1A2P43004 574 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 KCNK10P57789 538 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 MVKQ03426 396 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 EMX2Q04743 252 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 TPRG1LQ5T0D9 272 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 RNF135Q8IUD6 432 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 TMEM192Q8IY95 271 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 HS3ST5Q8IZT8 346 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 PSD4Q8NDX1 1056 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 HPDLQ96IR7 371 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 CDHR1Q96JP9 859 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SGIP1Q9BQI5 828 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 KCNN3Q9UGI6 736 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 WBP11Q9Y2W2 641 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 GPR45Q9Y5Y3 372 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 MYLKQ15746 1914 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 B8ZZF3 427 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 APBA3O96018 575 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ASNSP08243 561 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 FGF4P08620 206 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 HGFP14210 728 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ARNTP27540 789 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 FCGRTP55899 365 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SH3BP2P78314 561 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 GPLD1P80108 840 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 FCHO2Q0JRZ9 810 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 BAATQ14032 418 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 TARBP2Q15633 366 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 TYSND1Q2T9J0 566 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 PKN3Q6P5Z2 889 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 LYPD8Q6UX82 237 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 VN1R5Q7Z5H4 357 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SYTL1Q8IYJ3 562 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 DTWD1Q8N5C7 304 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 TWIST2Q8WVJ9 160 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ISG20Q96AZ6 181 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 HSFY1Q96LI6 401 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 C6orf62Q9GZU0 229 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 NXF2Q9GZY0 626 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM124BQ9H5Z6 455 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 PIF1Q9H611 641 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 RPAP3Q9H6T3 665 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 RPF1Q9H9Y2 349 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms