RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 RIBC1Q8N443 379 aaPredicted RBP13.13□□□□□ -0.31
CNN3-203ENST00000415017 RASGEF1AQ8N9B8 481 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 SERAC1Q96JX3 654 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 PKNOX2Q96KN3 472 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 LINC00615Q96LM1 132 aaPredicted RBP13.13□□□□□ -0.31
CNN3-203ENST00000415017 TTC1Q99614 292 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 TM9SF3Q9HD45 589 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 PHPT1Q9NRX4 125 aaPredicted RBP13.13□□□□□ -0.31
CNN3-203ENST00000415017 ATXN10Q9UBB4 475 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 EIF2B4Q9UI10 523 aaKnown RBP13.13□□□□□ -0.31
CNN3-203ENST00000415017 GPR34Q9UPC5 381 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 CA5BQ9Y2D0 317 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 OR1A2Q9Y585 309 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 PCDHB1Q9Y5F3 818 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 COMMD10Q9Y6G5 202 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 PRSS21Q9Y6M0 314 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 FRYLO94915 3013 aa13.13□□□□□ -0.31
CNN3-203ENST00000415017 TMEM131Q92545 1883 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 SDK1Q7Z5N4 2213 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 TMEM202A6NGA9 273 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 TNFRSF10CO14798 259 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 PFDN6O15212 129 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 INPP4BO15327 924 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 NUAK1O60285 661 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 NDUFS3O75489 264 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 IVLP07476 585 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 F7P08709 466 aaPredicted RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 ATP1B2P14415 290 aaPredicted RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 PMLP29590 882 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 SPRP35270 261 aaPredicted RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 MSH2P43246 934 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 DNAJC3Q13217 504 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 ZKSCAN8Q15776 578 aaPredicted RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 SMAD1Q15797 465 aaKnown RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 WDR45BQ5MNZ6 344 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 SH2D5Q6ZV89 423 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 ZNF547Q8IVP9 402 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 DEFB119Q8N690 84 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 CLDN19Q8N6F1 224 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 ACVR1CQ8NER5 493 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 OR13H1Q8NG92 308 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 EPS8L3Q8TE67 593 aaKnown RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 VPS39Q96JC1 886 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 ZNF514Q96K75 400 aaPredicted RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 SLC6A18Q96N87 628 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 SH3GL2Q99962 352 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 AARSD1Q9BTE6 412 aaKnown RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 RMI1Q9H9A7 625 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 PSMC3IPQ9P2W1 217 aaPredicted RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 GULP1Q9UBP9 304 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 PILRBQ9UKJ0 227 aa13.12□□□□□ -0.31
CNN3-203ENST00000415017 PNMA8BQ9ULN7 279 aaPredicted RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 MTO1Q9Y2Z2 717 aaKnown RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 DNMT3AQ9Y6K1 912 aaPredicted RBP13.12□□□□□ -0.31
CNN3-203ENST00000415017 SPTY2D1-AS1A0A0U1RR47 76 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 POC1B-GALNT4F8VUJ3 575 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 QSOX1O00391 747 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 RASGRF2O14827 1237 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 VILLO15195 856 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 RHOBTB1O94844 696 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 INHBAP08476 426 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 ITGA2BP08514 1039 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 PKMP14618 531 aaKnown RBP13.11□□□□□ -0.31
CNN3-203ENST00000415017 FDXRP22570 491 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 CD38P28907 300 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 HOXD12P35452 270 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 PRLHRP49683 370 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 CTSCP53634 463 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 GBX1Q14549 363 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 RBM20Q5T481 1227 aaKnown RBP13.11□□□□□ -0.31
CNN3-203ENST00000415017 ZNF648Q5T619 568 aaPredicted RBP13.11□□□□□ -0.31
CNN3-203ENST00000415017 LYSMD4Q5XG99 296 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 KCTD16Q68DU8 428 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 Q6ZSR6 202 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 CROCCP2Q86T23 111 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 TRIM74Q86UV6 250 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 CYP4X1Q8N118 509 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 OXR1Q8N573 874 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 KCNJ9Q92806 393 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 PGM2Q96G03 612 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 PRRX2Q99811 253 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 KLHL42Q9P2K6 505 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 CRYL1Q9Y2S2 319 aa13.11□□□□□ -0.31
CNN3-203ENST00000415017 PCYT1BQ9Y5K3 369 aaPredicted RBP13.11□□□□□ -0.31
CNN3-203ENST00000415017 C17orf113A0A1B0GUU1 675 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 MEI4A8MW99 385 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 CFAP99D6REC4 459 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 H3BMM5 538 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 CACNB4O00305 520 aaPredicted RBP13.1□□□□□ -0.31
CNN3-203ENST00000415017 MTX2O75431 263 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 RFPL1O75677 317 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 CDK14O94921 469 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 ALDOAP04075 364 aaKnown RBP13.1□□□□□ -0.31
CNN3-203ENST00000415017 GSTM1P09488 218 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 RALBP11234 206 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 ZNF8P17098 575 aaPredicted RBP13.1□□□□□ -0.31
CNN3-203ENST00000415017 MSH3P20585 1137 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 KELP23276 732 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 ITPKAP23677 461 aa13.1□□□□□ -0.31
CNN3-203ENST00000415017 MAOBP27338 520 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms