RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 EPHX1P07099 455 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 SERPINA6P08185 405 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 OSMP13725 252 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 TGM1P22735 817 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 AQP4P55087 323 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 TAP2Q03519 686 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 PTPN11Q06124 597 aaPredicted RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 DLG1Q12959 904 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 KRT81Q14533 505 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 AGERQ15109 404 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 PDK1Q15118 436 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 HFEQ30201 348 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 PAN2Q504Q3 1202 aaKnown RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 KLHL24Q6TFL4 600 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ALKAL1Q6UXT8 129 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ARHGAP36Q6ZRI8 547 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 SCN4BQ8IWT1 228 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 KATNAL2Q8IYT4 538 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 BBS5Q8N3I7 341 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ALLCQ8N6M5 410 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 CATSPER1Q8NEC5 780 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 EXD1Q8NHP7 514 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 MZB1Q8WU39 189 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 SDCCAG3Q96C92 435 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 APOPT1Q96IL0 206 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 DNAJC1Q96KC8 554 aaKnown RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 PAFAH2Q99487 392 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 FAM118BQ9BPY3 351 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 RBM38Q9H0Z9 239 aaKnown RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 HIPK3Q9H422 1215 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ACSS3Q9H6R3 686 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 SYNDIG1Q9H7V2 258 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ZNF696Q9H7X3 374 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 FKBP14Q9NWM8 211 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 SLC17A7Q9P2U7 560 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 CROTQ9UKG9 612 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 FAM237BA0A1B0GVD1 139 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ARHGAP42A6NI28 874 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ERVH48-1M5A8F1 160 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 TRMUO75648 421 aaKnown RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 METTL18O95568 372 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 CYP11B1P15538 503 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 SELPP16109 830 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 EN2P19622 333 aaPredicted RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 AXLP30530 894 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 WNT5AP41221 380 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ETV4P43268 484 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ASPAP45381 313 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 GATMP50440 423 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 GALK1P51570 392 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ARSEP51690 589 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 DSTNP60981 165 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 SLC18A2Q05940 514 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 KDSRQ06136 332 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 KCNAB2Q13303 367 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 COTL1Q14019 142 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 PDCD1Q15116 288 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 TRIP10Q15642 601 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 NADK2Q4G0N4 442 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 C4orf48Q5BLP8 95 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 DUS1LQ6P1R4 473 aaKnown RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 TMEM270Q6UE05 265 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 TMCO2Q7Z6W1 182 aaPredicted RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 TAF8Q7Z7C8 310 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ALYREFQ86V81 257 aaKnown RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 TMEM126BQ8IUX1 230 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 PHC2Q8IXK0 858 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 DBF4BQ8NFT6 615 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 RAB3IL1Q8TBN0 382 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 PYROXD1Q8WU10 500 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 SLC35B4Q969S0 331 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 FAM162AQ96A26 154 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 MCOLN1Q9GZU1 580 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 SDCBP2Q9H190 292 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 IGFLR1Q9H665 355 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 BRF2Q9HAW0 419 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 ZFYVE1Q9HBF4 777 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 SIRT3Q9NTG7 399 aaPredicted RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 HCSTQ9UBK5 93 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 FAF1Q9UNN5 650 aaPredicted RBP9.33□□□□□ -0.92
SNHG3-201ENST00000413987 MAD1L1Q9Y6D9 718 aa9.33□□□□□ -0.92
SNHG3-201ENST00000413987 REV3LO60673 3130 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 A0A088AWK7 358 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 TRAV34A0A0B4J273 112 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 ARL5CA6NH57 179 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 CASTOR2A6NHX0 329 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 SLC9B1P1A6NJY1 282 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 A8MV72 311 aaPredicted RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 TTC34A8MYJ7 566 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 LIASO43766 372 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PDE5AO76074 875 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PROSCO94903 275 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 KLHL2O95198 593 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 HTR3BO95264 441 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PRAMEF12O95522 483 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 AOC1P19801 751 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 ACO1P21399 889 aaKnown RBP9.32□□□□□ -0.92
SNHG3-201ENST00000413987 BGNP21810 368 aa9.32□□□□□ -0.92
SNHG3-201ENST00000413987 PTBP1P26599 531 aaKnown RBP eCLIP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms