RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SEMA6AQ9H2E6 1030 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 SLCO1B3Q9NPD5 702 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 DZANK1Q9NVP4 752 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 HMGXB4Q9UGU5 601 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 CD84Q9UIB8 345 aa17.14■□□□□ 0.33
PHRF1-202ENST00000413872 DHRS12A0PJE2 317 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 SLC31A1O15431 190 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 NMBRP28336 390 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 RPS24P62847 133 aaKnown RBP17.13■□□□□ 0.33
PHRF1-202ENST00000413872 FBXL22Q6P050 247 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 FOXR1Q6PIV2 292 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 SPESP1Q6UW49 350 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 TWIST2Q8WVJ9 160 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 EMID1Q96A84 441 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-202ENST00000413872 MCMBPQ9BTE3 642 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 TBC1D10AQ9BXI6 508 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 NUSAP1Q9BXS6 441 aaKnown RBP17.13■□□□□ 0.33
PHRF1-202ENST00000413872 DDX18Q9NVP1 670 aaKnown RBP17.13■□□□□ 0.33
PHRF1-202ENST00000413872 DNAJC28Q9NX36 388 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 PCDHGA11Q9Y5H2 935 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 PRPS2P11908 318 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 VARSP26640 1264 aaKnown RBP17.13■□□□□ 0.33
PHRF1-202ENST00000413872 GDI1P31150 447 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 ATXN7L2Q5T6C5 722 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-202ENST00000413872 BPIFB1Q8TDL5 484 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 OLFM1Q99784 485 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 ABCG8Q9H221 673 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 TDP1Q9NUW8 608 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 GMPPBQ9Y5P6 360 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 ZNF142P52746 1687 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-202ENST00000413872 PTGES3LE9PB15 166 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 CCNA2P20248 432 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 FECHP22830 423 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 ZNF132P52740 706 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 CYP4F2P78329 520 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 C11orf88Q6PI97 169 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 PXYLP1Q8TE99 480 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 SLC38A3Q99624 504 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 SAMHD1Q9Y3Z3 626 aaKnown RBP17.13■□□□□ 0.33
PHRF1-202ENST00000413872 KRT33AO76009 404 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 ADSLP30566 484 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-202ENST00000413872 ZNF33AQ06730 810 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 GTF2H2Q13888 395 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 UBAP2LQ14157 1087 aaKnown RBP17.13■□□□□ 0.33
PHRF1-202ENST00000413872 LPIN1Q14693 890 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 ANKRD22Q5VYY1 191 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 GTF2H2CQ6P1K8 395 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 AAGABQ6PD74 315 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 AMZ2Q86W34 360 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 SLC35F5Q8WV83 523 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 SLC22A18Q96BI1 424 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 NOL11Q9H8H0 719 aaKnown RBP17.13■□□□□ 0.33
PHRF1-202ENST00000413872 KLHL1Q9NR64 748 aa17.13■□□□□ 0.33
PHRF1-202ENST00000413872 CST1P01037 141 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 MPSTP25325 297 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 MLLT6P55198 1093 aaPredicted RBP17.12■□□□□ 0.33
PHRF1-202ENST00000413872 CA9Q16790 459 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 XKR4Q5GH76 650 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 CEP78Q5JTW2 689 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 FSTL4Q6MZW2 842 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 IRGCQ6NXR0 463 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 ATG10Q9H0Y0 220 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 C8orf4Q9NR00 106 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 IL36AQ9UHA7 158 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 INSL5Q9Y5Q6 135 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 DNAJA2O60884 412 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 FGF18O76093 207 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 NUP62P37198 522 aaPredicted RBP17.12■□□□□ 0.33
PHRF1-202ENST00000413872 MYDGFQ969H8 173 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 NUS1Q96E22 293 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 LPIN3Q9BQK8 851 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 OR10H3O60404 316 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 HSPA7P48741 367 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 CHIT1Q13231 466 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 POLR3BQ9NW08 1133 aaPredicted RBP17.12■□□□□ 0.33
PHRF1-202ENST00000413872 LRP6O75581 1613 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 EDDM13A0A1B0GTR0 161 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 ANXA4P09525 319 aaPredicted RBP17.12■□□□□ 0.33
PHRF1-202ENST00000413872 GNAZP19086 355 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 SLC7A2P52569 658 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 SPIBQ01892 262 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 C2orf80Q0P641 193 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 LDLRAD1Q5T700 205 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 PDE12Q6L8Q7 609 aaKnown RBP17.12■□□□□ 0.33
PHRF1-202ENST00000413872 TEX47Q8TBZ9 253 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 AZIN2Q96A70 460 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 OTUB2Q96DC9 234 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 B3GALT6Q96L58 329 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 BTBD9Q96Q07 612 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 IKZF3Q9UKT9 509 aa17.12■□□□□ 0.33
PHRF1-202ENST00000413872 PTGIRP43119 386 aa17.11■□□□□ 0.33
PHRF1-202ENST00000413872 POLR2JP52435 117 aaKnown RBP17.11■□□□□ 0.33
PHRF1-202ENST00000413872 BNC1Q01954 994 aa17.11■□□□□ 0.33
PHRF1-202ENST00000413872 GHRHRQ02643 423 aa17.11■□□□□ 0.33
PHRF1-202ENST00000413872 SLC9A5Q14940 896 aa17.11■□□□□ 0.33
PHRF1-202ENST00000413872 SERINC5Q86VE9 423 aa17.11■□□□□ 0.33
PHRF1-202ENST00000413872 TMC8Q8IU68 726 aa17.11■□□□□ 0.33
PHRF1-202ENST00000413872 HID1Q8IV36 788 aa17.11■□□□□ 0.33
PHRF1-202ENST00000413872 OR2AP1Q8NGE2 309 aa17.11■□□□□ 0.33
PHRF1-202ENST00000413872 ELAC1Q9H777 363 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms