RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 COL4A3Q01955 1670 aa8.53□□□□□ -1.04
HMGN1P34-201ENST00000413023 EDDM13A0A1B0GTR0 161 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 GRXCR2A6NFK2 248 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 SHISA7A6NL88 538 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 PRR5-ARHGAP8B1AHC4 643 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 KPNA3O00505 521 aaPredicted RBP8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 SDHDO14521 159 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 DIAPH2O60879 1101 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 KERAO60938 352 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 H2AFYO75367 372 aaKnown RBP8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 MTX2O75431 263 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 SUPT7LO94864 414 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 CDK14O94921 469 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 UNC5CO95185 931 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 SOD1P00441 154 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 PYGLP06737 847 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 SERPINA6P08185 405 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 ZNF7P17097 686 aaPredicted RBP8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 KIR2DL1P43626 348 aaPredicted RBP8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 FOXA1P55317 472 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 IL2P60568 153 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 ATP6V0D1P61421 351 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 ST8SIA6P61647 398 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 HERVK_113P63132 956 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 ARHGAP8P85298 464 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 NFKB2Q00653 900 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 ZBTB16Q05516 673 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 PRKAA1Q13131 559 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 HTR4Q13639 388 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 ENPP2Q13822 863 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 GBX1Q14549 363 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 KRT72Q14CN4 511 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 SETDB1Q15047 1291 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 PFKFB4Q16877 469 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 LSM12Q3MHD2 195 aaKnown RBP8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 ITPRIPL2Q3MIP1 535 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 AARS2Q5JTZ9 985 aaKnown RBP8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 SPDYAQ5MJ70 313 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 HENMT1Q5T8I9 393 aaKnown RBP8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 UGT3A1Q6NUS8 523 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 KLC3Q6P597 504 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 TXNDC11Q6PKC3 985 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 XKR5Q6UX68 686 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 SERPINA13PQ6UXR4 307 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 EP400NLQ6ZTU2 488 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 FRMD7Q6ZUT3 714 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 VRK3Q8IV63 474 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 C10orf67Q8IYJ2 551 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 NKAPQ8N5F7 415 aaKnown RBP8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 ZBTB2Q8N680 514 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 STAG3L4Q8TBR4 150 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 SUSD6Q92537 303 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 RILPQ96NA2 401 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 TRMT61BQ9BVS5 477 aaKnown RBP8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 ERVK-6Q9BXR3 956 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 NUF2Q9BZD4 464 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 CLPBQ9H078 707 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 WWP1Q9H0M0 922 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 CCDC68Q9H2F9 335 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 ZNF385DQ9H6B1 395 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 SLC40A1Q9NP59 571 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 CACNA2D2Q9NY47 1150 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 TRMT6Q9UJA5 497 aaKnown RBP8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 ZNF225Q9UK10 706 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 STON1Q9Y6Q2 735 aa8.52□□□□□ -1.05
HMGN1P34-201ENST00000413023 NUP210Q8TEM1 1887 aaPredicted RBP8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 F8W8V4 182 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 K7ESM1 405 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 BTN3A1O00481 513 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 HDAC3O15379 428 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 MMP20O60882 483 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 SMIM24O75264 130 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 RASSF9O75901 435 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 FGF4P08620 206 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 KRT16P08779 473 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 TPBGLP0DKB5 382 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 NQO1P15559 274 aaKnown RBP8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 ZNF30P17039 623 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 POU3F3P20264 500 aaPredicted RBP8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 ITGB7P26010 798 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 AOAHP28039 575 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 PRDX3P30048 256 aaKnown RBP8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 MMP12P39900 470 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 GRIA2P42262 883 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 MAGEA9P43362 315 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 KPNA2P52292 529 aaKnown RBP8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 CTSCP53634 463 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 TAS2R38P59533 333 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 ELF3P78545 371 aaPredicted RBP8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 BTKQ06187 659 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 CNTN1Q12860 1018 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 EIF4HQ15056 248 aaKnown RBP8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 ACOX1Q15067 660 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 PHKG1Q16816 387 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 PPP1R3AQ16821 1122 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 AAK1Q2M2I8 961 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 TMEM52BQ4KMG9 183 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 SH2D4BQ5SQS7 431 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 LYPLAL1Q5VWZ2 237 aa8.51□□□□□ -1.05
HMGN1P34-201ENST00000413023 TMEM198Q66K66 360 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms