RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 FAM98AQ8NCA5 519 aaKnown RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 GMCL1P1Q8NEA9 526 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 SEMA6DQ8NFY4 1073 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 CCDC110Q8TBZ0 833 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 MAP4K1Q92918 833 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 EXT2Q93063 718 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 NXNL1Q96CM4 212 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 FRG2BQ96QU4 278 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 CTAGE1Q96RT6 745 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 SIN3AQ96ST3 1273 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 ABHD6Q9BV23 337 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 IFT27Q9BW83 186 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 NYXQ9GZU5 481 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 SCAND2PQ9GZW5 306 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 ZNF350Q9GZX5 532 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 SLCO5A1Q9H2Y9 848 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 RWDD1Q9H446 243 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 ANKZF1Q9H8Y5 726 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 SLC28A3Q9HAS3 691 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 TUFT1Q9NNX1 390 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 FANCFQ9NPI8 374 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 POLE3Q9NRF9 147 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 COMMD8Q9NX08 183 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 VPS18Q9P253 973 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 LAMP5Q9UJQ1 280 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 HPCAL4Q9UM19 191 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 CARD8Q9Y2G2 431 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 ANGPTL3Q9Y5C1 460 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 WDR33Q9C0J8 1336 aaKnown RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 SLC22A23A1A5C7 686 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 CXorf65A6NEN9 183 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 SLC9B1P1A6NJY1 282 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 SLC30A4O14863 429 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 MCF2LO15068 1137 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 ST8SIA3O43173 380 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 RLN1P04808 185 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 CHRNA5P30532 468 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 IFNAR2P48551 515 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 NAGLUP54802 743 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 TAS2R40P59535 323 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 SLC10A2Q12908 348 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-204ENST00000412061 KRT33BQ14525 404 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 SGCBQ16585 318 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 MAJINQ3KP22 176 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 PLK5Q496M5 336 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 CEP55Q53EZ4 464 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 MDH1BQ5I0G3 518 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 KIAA1755Q5JYT7 1200 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 C12orf60Q5U649 245 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 SHEQ5VZ18 495 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 LCTLQ6UWM7 567 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 MFSD7Q6UXD7 560 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 LRIG3Q6UXM1 1119 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 CYB5R4Q7L1T6 521 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 PTF1AQ7RTS3 328 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 ABI3BPQ7Z7G0 1075 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 HACE1Q8IYU2 909 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 FBXO39Q8N4B4 442 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 TMEM217Q8N7C4 229 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 ARL14EPQ8N8R7 260 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-204ENST00000412061 URGCPQ8TCY9 931 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 BICD2Q8TD16 824 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 DNASE1L2Q92874 299 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 SPACA9Q96E40 222 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-204ENST00000412061 RMDN2Q96LZ7 410 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 TEFMQ96QE5 360 aaKnown RBP4.49□□□□□ -1.69
BRCA1-204ENST00000412061 TMEM47Q9BQJ4 181 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 NTPCRQ9BSD7 190 aaKnown RBP4.49□□□□□ -1.69
BRCA1-204ENST00000412061 CRACR2AQ9BSW2 395 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 INPP5KQ9BT40 448 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 KCNK15Q9H427 330 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 RIOX1Q9H6W3 641 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 C17orf75Q9HAS0 396 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 MOV10Q9HCE1 1003 aaKnown RBP4.49□□□□□ -1.69
BRCA1-204ENST00000412061 EPB41L5Q9HCM4 733 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 BPIFA1Q9NP55 256 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 GRHL1Q9NZI5 618 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 FBXO40Q9UH90 709 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 IL17BQ9UHF5 180 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 SLC24A2Q9UI40 661 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 NAP1L2Q9ULW6 460 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-204ENST00000412061 TDRKHQ9Y2W6 561 aaKnown RBP4.49□□□□□ -1.69
BRCA1-204ENST00000412061 KIF3AQ9Y496 699 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 CEPT1Q9Y6K0 416 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 ARHGEF40Q8TER5 1519 aa4.49□□□□□ -1.69
BRCA1-204ENST00000412061 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 JRKO75564 520 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 LINGO3P0C6S8 592 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 ETS1P14921 441 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 EPORP19235 508 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 KLRC2P26717 231 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 CD27P26842 260 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 PBLDP30039 288 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 CDC25CP30307 473 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 SHMT1P34896 483 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 ACAA2P42765 397 aaKnown RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 PSMC4P43686 418 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 HNMTP50135 292 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 ADORA2A-AS1P86434 159 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 MRPL28Q13084 256 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms