RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ZNF7P17097 686 aaPredicted RBP30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 TPSB2P20231 275 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 AKT1P31749 480 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 FNTAP49354 379 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 CLCNKAP51800 687 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 CTSCP53634 463 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 GPS1Q13098 491 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 TARDBPQ13148 414 aaKnown RBP eCLIP30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 CAMK2BQ13554 666 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 TPSAB1Q15661 275 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 UNQ6494/PRO21346Q6UXR6 183 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 C11orf96Q7Z7L8 435 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 ULK4Q96C45 1275 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 CDKN2AIPNLQ96HQ2 116 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 FAM96AQ9H5X1 160 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 LRIT1Q9P2V4 623 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 NEU2Q9Y3R4 380 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 SLC30A1Q9Y6M5 507 aa30.72■■■□□ 2.51
TRAF3IP1-203ENST00000409739 CTAGE9A4FU28 777 aa30.71■■■□□ 2.51
TRAF3IP1-203ENST00000409739 A6NCN8 305 aa30.71■■■□□ 2.51
TRAF3IP1-203ENST00000409739 PNLIPP16233 465 aa30.71■■■□□ 2.51
TRAF3IP1-203ENST00000409739 ARSDP51689 593 aa30.71■■■□□ 2.51
TRAF3IP1-203ENST00000409739 NXPE1Q8N323 547 aa30.71■■■□□ 2.51
TRAF3IP1-203ENST00000409739 CAPZA3Q96KX2 299 aa30.71■■■□□ 2.51
TRAF3IP1-203ENST00000409739 OSGEPL1Q9H4B0 414 aa30.71■■■□□ 2.51
TRAF3IP1-203ENST00000409739 TCAF1Q9Y4C2 921 aa30.71■■■□□ 2.51
TRAF3IP1-203ENST00000409739 SAR1BQ9Y6B6 198 aa30.71■■■□□ 2.51
TRAF3IP1-203ENST00000409739 TCRBV7S3A2A0A539 114 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 PRR19A6NJB7 356 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 MSH3P20585 1137 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 ADRA1DP25100 572 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 KCNJ11Q14654 390 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 ZNF534Q76KX8 674 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 ZNF438Q7Z4V0 828 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 CCNJLQ8IV13 435 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 OR13J1Q8NGT2 312 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 WDR48Q8TAF3 677 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 SLC37A2Q8TED4 501 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 SYNDIG1Q9H7V2 258 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 DNAJC16Q9Y2G8 782 aa30.7■■■□□ 2.51
TRAF3IP1-203ENST00000409739 FREM2Q5SZK8 3169 aa30.7■■■□□ 2.5
TRAF3IP1-203ENST00000409739 TRBV5-4A0A0C4DH59 114 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 OR2AG2A6NM03 316 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 NTN3O00634 580 aaPredicted RBP30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 SNX2O60749 519 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 F3P13726 295 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 MAGEA6P43360 314 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 CDKN1CP49918 316 aaPredicted RBP30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 TERF1P54274 439 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 CCL7P80098 99 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 CDK16Q00536 496 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 B4GALNT1Q00973 533 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 LAMB3Q13751 1172 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 SKIDA1Q1XH10 827 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 GPR33Q49SQ1 333 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 ZRANB3Q5FWF4 1079 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 TSTD2Q5T7W7 516 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 SPRED1Q7Z699 444 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 CREG2Q8IUH2 290 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 SFRP1Q8N474 314 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 GRK7Q8WTQ7 553 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 CCDC97Q96F63 343 aaPredicted RBP30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 DEPDC7Q96QD5 511 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 RIMKLBQ9ULI2 386 aa30.69■■■□□ 2.5
TRAF3IP1-203ENST00000409739 A0A1W2PQM1 296 aa30.68■■■□□ 2.5
TRAF3IP1-203ENST00000409739 TCEA3O75764 348 aa30.68■■■□□ 2.5
TRAF3IP1-203ENST00000409739 PRSS56P0CW18 603 aa30.68■■■□□ 2.5
TRAF3IP1-203ENST00000409739 SESN2P58004 480 aaPredicted RBP30.68■■■□□ 2.5
TRAF3IP1-203ENST00000409739 TMEM220Q6QAJ8 160 aa30.68■■■□□ 2.5
TRAF3IP1-203ENST00000409739 DET1Q7L5Y6 550 aa30.68■■■□□ 2.5
TRAF3IP1-203ENST00000409739 Q8N9G6 341 aaPredicted RBP30.68■■■□□ 2.5
TRAF3IP1-203ENST00000409739 ZNF778Q96MU6 729 aa30.68■■■□□ 2.5
TRAF3IP1-203ENST00000409739 DDX47Q9H0S4 455 aaKnown RBP30.68■■■□□ 2.5
TRAF3IP1-203ENST00000409739 PRDM8Q9NQV8 689 aa30.68■■■□□ 2.5
TRAF3IP1-203ENST00000409739 SLC2A6Q9UGQ3 507 aa30.68■■■□□ 2.5
TRAF3IP1-203ENST00000409739 RHPN2P1A8MT19 583 aa30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 CSO75390 466 aaKnown RBP30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 RPLP0P05388 317 aaKnown RBP30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 FASLGP48023 281 aa30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 CACNG1Q06432 222 aa30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 SPIDRQ14159 915 aa30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 NR1D2Q14995 579 aa30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 IYDQ6PHW0 289 aa30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 RBM44Q6ZP01 1051 aaKnown RBP30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 PPHLN1Q8NEY8 458 aaKnown RBP30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 NAT14Q8WUY8 206 aa30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 LRRN3Q9H3W5 708 aa30.67■■■□□ 2.5
TRAF3IP1-203ENST00000409739 TRBV23OR9-2A0A075B6M9 112 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 OR51F1A6NGY5 319 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 PPM1DO15297 605 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 ACRV1P26436 265 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 CRADDP78560 199 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 ACVR1Q04771 509 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 BIRC2Q13490 618 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 FNBP1LQ5T0N5 605 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 ANKRD22Q5VYY1 191 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 LRRC8BQ6P9F7 803 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 SERPINA9Q86WD7 417 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 PIANPQ8IYJ0 282 aa30.66■■■□□ 2.5
TRAF3IP1-203ENST00000409739 CPT1BQ92523 772 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms