RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 STK32CQ86UX6 486 aa15.33■□□□□ 0.04
LIMS2-205ENST00000409455 GABPB2Q8TAK5 448 aaPredicted RBP15.33■□□□□ 0.04
LIMS2-205ENST00000409455 AURKBQ96GD4 344 aaPredicted RBP15.33■□□□□ 0.04
LIMS2-205ENST00000409455 BTN2A3PQ96KV6 586 aa15.33■□□□□ 0.04
LIMS2-205ENST00000409455 UBXN10Q96LJ8 280 aa15.33■□□□□ 0.04
LIMS2-205ENST00000409455 ASB2Q96Q27 587 aa15.33■□□□□ 0.04
LIMS2-205ENST00000409455 FICDQ9BVA6 458 aa15.33■□□□□ 0.04
LIMS2-205ENST00000409455 SERPINB1P30740 379 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 EEFSECP57772 596 aaKnown RBP15.32■□□□□ 0.04
LIMS2-205ENST00000409455 SELENBP1Q13228 472 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 INAVAQ3KP66 663 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 ARL13BQ3SXY8 428 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 UNC50Q53HI1 259 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 C6orf141Q5SZD1 244 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 DSG4Q86SJ6 1040 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 CCDC117Q8IWD4 279 aaPredicted RBP15.32■□□□□ 0.04
LIMS2-205ENST00000409455 SCML4Q8N228 414 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 SLC43A3Q8NBI5 491 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 ZNF555Q8NEP9 628 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 TSPEARQ8WU66 669 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 TMBIM1Q969X1 311 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 NSMCE2Q96MF7 247 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 SLC2A13Q96QE2 648 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 CYP2S1Q96SQ9 504 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 PAAF1Q9BRP4 392 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 MID1IP1Q9NPA3 183 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 TREX1Q9NSU2 369 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 ZNF229Q9UJW7 825 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 POU2F3Q9UKI9 436 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 H3BMM5 538 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 AZIN1O14977 448 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 SLC22A1O15245 554 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 TULP3O75386 442 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 POMCP01189 267 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 HTR1AP08908 422 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 CDH1P12830 882 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 PTPN2P17706 415 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 ITIH1P19827 911 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 CASP2P42575 452 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 PRMT2P55345 433 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 ECT2LQ008S8 904 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 DGUOKQ16854 277 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 WSCD1Q658N2 575 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 SPNS2Q8IVW8 549 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 CALML6Q8TD86 181 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 ANKRD49Q8WVL7 239 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 VPS33AQ96AX1 596 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 CELF6Q96J87 481 aaKnown RBP15.32■□□□□ 0.04
LIMS2-205ENST00000409455 RDH12Q96NR8 316 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 BCL7BQ9BQE9 202 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 FSD1LQ9BXM9 530 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 TOR3AQ9H497 397 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 SIAEQ9HAT2 523 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 PCDHGA8Q9Y5G5 932 aa15.32■□□□□ 0.04
LIMS2-205ENST00000409455 PDCD11Q14690 1871 aaKnown RBP15.31■□□□□ 0.04
LIMS2-205ENST00000409455 CASTOR2A6NHX0 329 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 HPRP00739 348 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 HTR1EP28566 365 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 TKTP29401 623 aaKnown RBP15.31■□□□□ 0.04
LIMS2-205ENST00000409455 NFKB2Q00653 900 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 EPS8Q12929 822 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 MBTPS1Q14703 1052 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 CLPPQ16740 277 aaPredicted RBP15.31■□□□□ 0.04
LIMS2-205ENST00000409455 TRAF7Q6Q0C0 670 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 NEK10Q6ZWH5 1172 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 ADCK1Q86TW2 530 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 OSTM1Q86WC4 334 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 ZDHHC13Q8IUH4 622 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 PHYKPLQ8IUZ5 450 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 CHDHQ8NE62 594 aaPredicted RBP15.31■□□□□ 0.04
LIMS2-205ENST00000409455 EXT2Q93063 718 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 PRKD2Q9BZL6 878 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 NDEL1Q9GZM8 345 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 NTN4Q9HB63 628 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 FBXO8Q9NRD0 319 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 IFT52Q9Y366 437 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 NUP205Q92621 2012 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 CACNG3O60359 315 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 NDUFS2O75306 463 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 FGF4P08620 206 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 RCVRNP35243 200 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 NDUFV1P49821 464 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 ILF2Q12905 390 aaKnown RBP15.31■□□□□ 0.04
LIMS2-205ENST00000409455 TOP3AQ13472 1001 aaPredicted RBP15.31■□□□□ 0.04
LIMS2-205ENST00000409455 RCAN2Q14206 197 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 SF3B4Q15427 424 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIMS2-205ENST00000409455 MAPK11Q15759 364 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 PAGE2BQ5JRK9 111 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 HECTD2Q5U5R9 776 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 DENND5AQ6IQ26 1287 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 RAB44Q7Z6P3 723 aaPredicted RBP15.31■□□□□ 0.04
LIMS2-205ENST00000409455 SLC22A16Q86VW1 577 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 KLHDC8BQ8IXV7 354 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 MFSD4AQ8N468 514 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 TOP6BLQ8N6T0 577 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 ARL10Q8N8L6 244 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 C3orf58Q8NDZ4 430 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 TMEM74Q96NL1 305 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 NODALQ96S42 347 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms