RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 NAA11Q9BSU3 229 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 NUP85Q9BW27 656 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 ISCUQ9H1K1 167 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 R3HDMLQ9H3Y0 253 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 TUBA8Q9NY65 449 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 LARSQ9P2J5 1176 aaKnown RBP4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 CRNNQ9UBG3 495 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 TSPYL4Q9UJ04 414 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 COG5Q9UP83 839 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 KANK1Q14678 1352 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 A2MP01023 1474 aa4.74□□□□□ -1.65
HMGB3P18-201ENST00000406327 ZBED9Q6R2W3 1325 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 TMEM8BA6NDV4 472 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 GOLGA6L9A6NEM1 432 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 URADA6NGE7 173 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 SPINT2O43291 252 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 LDB2O43679 373 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 MOSPD3O75425 235 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 VNN2O95498 520 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 SYF2O95926 243 aaKnown RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 EGFP01133 1207 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 NAGAP17050 411 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 TCEA1P23193 301 aaKnown RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 STX2P32856 288 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 P2RX3P56373 397 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 SCN1BQ07699 218 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 SRSF1Q07955 248 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 DLG2Q15700 870 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 MYLK3Q32MK0 819 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 DNTTIP2Q5QJE6 756 aaKnown RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 ZDHHC20Q5W0Z9 365 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 TMEM198Q66K66 360 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 KRT39Q6A163 491 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 ADCK2Q7Z695 626 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 LDB1Q86U70 411 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 CCAR2Q8N163 923 aaKnown RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 AADATQ8N5Z0 425 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 ZBTB8BQ8NAP8 495 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 GPT2Q8TD30 523 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 MAGEC3Q8TD91 643 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 AFAP1L1Q8TED9 768 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 TEKT4Q8WW24 435 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 COQ8BQ96D53 544 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 NEK1Q96PY6 1258 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 KXD1Q9BQD3 176 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 QTRT1Q9BXR0 403 aaKnown RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 POLDIP3Q9BY77 421 aaKnown RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 PCED1AQ9H1Q7 454 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 OPA3Q9H6K4 179 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 ANKZF1Q9H8Y5 726 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 C17orf75Q9HAS0 396 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 CLK4Q9HAZ1 481 aaKnown RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 MBNL1Q9NR56 388 aaKnown RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 ADARB2Q9NS39 739 aaKnown RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 SIRT3Q9NTG7 399 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 TRMT1Q9NXH9 659 aaKnown RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 TAS2R14Q9NYV8 317 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 CDC14AQ9UNH5 594 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 HS3ST3B1Q9Y662 390 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 ZFP37Q9Y6Q3 630 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 KTN1Q86UP2 1357 aaKnown RBP4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 KDM5CP41229 1560 aa4.73□□□□□ -1.65
HMGB3P18-201ENST00000406327 FLT1P17948 1338 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 ATXN2Q99700 1313 aaKnown RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 ARHGEF40Q8TER5 1519 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 IQGAP3Q86VI3 1631 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 A0A1W2PPC1 479 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 ARHGEF37A1IGU5 675 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 WIPF3A6NGB9 483 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 PI4K2BG5E9Z4 385 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 NDUFS4O43181 175 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 PLRG1O43660 514 aaKnown RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 NDUFB8O95169 186 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 SLU7O95391 586 aaKnown RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 BAG2O95816 211 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 BCL10O95999 233 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 FGBP02675 491 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 CYP1A2P05177 515 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 PFKFB1P16118 471 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 KELP23276 732 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 EEF1B2P24534 225 aaKnown RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 HOXD9P28356 352 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 PCGF2P35227 344 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 PIGAP37287 484 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 RPL3P39023 403 aaKnown RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 ZNF75DP51815 510 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 MVPQ14764 893 aaKnown RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 NR1D2Q14995 579 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 HYAL4Q2M3T9 481 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 FAM98BQ52LJ0 330 aaKnown RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 WASHC2DQ5SRD0 308 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 DCLRE1AQ6PJP8 1040 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 IQCA1Q86XH1 822 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 PRIMA1Q86XR5 153 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 CEP97Q8IW35 865 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 MFN1Q8IWA4 741 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 IQUBQ8NA54 791 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 C7orf57Q8NEG2 295 aa4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 GOT1L1Q8NHS2 421 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P18-201ENST00000406327 CFAP61Q8NHU2 1237 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms