RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 FILIP1LQ4L180 1135 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 ASB18Q6ZVZ8 466 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 ZNF547Q8IVP9 402 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 TRIM48Q8IWZ4 208 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 CCDC13Q8IYE1 715 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 CNTD1Q8N815 330 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 TEX19Q8NA77 164 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 KCTD6Q8NC69 237 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 CCNYQ8ND76 341 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 CT55Q8WUE5 264 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 FAF2Q96CS3 445 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 HDAC11Q96DB2 347 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 TRIB3Q96RU7 358 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 ZNF670Q9BS34 389 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 TRIM55Q9BYV6 548 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 ZFYVE1Q9HBF4 777 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 TRIM39Q9HCM9 518 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 TRIM10Q9UDY6 481 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 TLK1Q9UKI8 766 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 POLHQ9Y253 713 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 PCDHB3Q9Y5E6 796 aa11.73□□□□□ -0.53
LINC00544-201ENST00000400540 PCSK5Q92824 1860 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 MYO1FO00160 1098 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 KMOO15229 486 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 SPAG6O75602 509 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 RFPL1O75677 317 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 FGF5P12034 268 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 ZNF7P17097 686 aaPredicted RBP11.72□□□□□ -0.53
LINC00544-201ENST00000400540 PMS2P54278 862 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 RPS18P62269 152 aaKnown RBP11.72□□□□□ -0.53
LINC00544-201ENST00000400540 DNASE1L3Q13609 305 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 PCSK7Q16549 785 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 HADHQ16836 314 aaKnown RBP11.72□□□□□ -0.53
LINC00544-201ENST00000400540 CACHD1Q5VU97 1274 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 TCTN3Q6NUS6 607 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 IRGCQ6NXR0 463 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 PRSS42Q7Z5A4 293 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 LRRTM4Q86VH4 590 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 TRAM1L1Q8N609 369 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 AVL9Q8NBF6 648 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 GLYATL1Q969I3 302 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 BPIFA3Q9BQP9 254 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 ZSCAN5AQ9BUG6 496 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 TWSG1Q9GZX9 223 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 AKIRIN1Q9H9L7 192 aaPredicted RBP11.72□□□□□ -0.53
LINC00544-201ENST00000400540 TMEM63CQ9P1W3 806 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 TMPRSS11EQ9UL52 423 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 WDR37Q9Y2I8 494 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 ZNF711Q9Y462 761 aa11.72□□□□□ -0.53
LINC00544-201ENST00000400540 CELSR2Q9HCU4 2923 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 CENPEQ02224 2701 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 CCDC88CQ9P219 2028 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 PIPSLA2A3N6 862 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 GOLGA6L3A6NEY3 463 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 AURKAO14965 403 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 TOX3O15405 576 aaPredicted RBP11.71□□□□□ -0.53
LINC00544-201ENST00000400540 CREG1O75629 220 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 BPIP17213 487 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 MX2P20592 715 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 CASP14P31944 242 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 DCDC1P59894 354 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 IFI35P80217 286 aaPredicted RBP11.71□□□□□ -0.53
LINC00544-201ENST00000400540 PPIDQ08752 370 aaKnown RBP11.71□□□□□ -0.53
LINC00544-201ENST00000400540 CHAF1BQ13112 559 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 IL11RAQ14626 422 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 KCNAB1Q14722 419 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 NR1I3Q14994 352 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 NFKBIBQ15653 356 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 CPZQ66K79 652 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 CERS6Q6ZMG9 384 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 B4GALNT4Q76KP1 1039 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 TMC3Q7Z5M5 1100 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 C11orf96Q7Z7L8 435 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 ATCAYQ86WG3 371 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 PPP1R3BQ86XI6 285 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 GPR150Q8NGU9 434 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 KLHL6Q8WZ60 621 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 RAPGEF5Q92565 580 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 TIMM29Q9BSF4 260 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 ADGRE3Q9BY15 652 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 NAT10Q9H0A0 1025 aaKnown RBP11.71□□□□□ -0.53
LINC00544-201ENST00000400540 ACTL8Q9H568 366 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 SLC40A1Q9NP59 571 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 LHX9Q9NQ69 397 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 POT1Q9NUX5 634 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 HAUS2Q9NVX0 235 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 NFKBIL1Q9UBC1 381 aaPredicted RBP11.71□□□□□ -0.53
LINC00544-201ENST00000400540 PCDHGA6Q9Y5G7 932 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 SPO11Q9Y5K1 396 aa11.71□□□□□ -0.53
LINC00544-201ENST00000400540 ITPR2Q14571 2701 aa11.7□□□□□ -0.54
LINC00544-201ENST00000400540 IGHV5-51A0A0C4DH38 117 aa11.7□□□□□ -0.54
LINC00544-201ENST00000400540 GPR89AB7ZAQ6 455 aa11.7□□□□□ -0.54
LINC00544-201ENST00000400540 GPR39O43194 453 aa11.7□□□□□ -0.54
LINC00544-201ENST00000400540 PROSCO94903 275 aa11.7□□□□□ -0.54
LINC00544-201ENST00000400540 MT-CYBP00156 380 aaPredicted RBP11.7□□□□□ -0.54
LINC00544-201ENST00000400540 SERPING1P05155 500 aa11.7□□□□□ -0.54
LINC00544-201ENST00000400540 CCNYL3P0C7X3 344 aa11.7□□□□□ -0.54
LINC00544-201ENST00000400540 GPR89BP0CG08 455 aa11.7□□□□□ -0.54
LINC00544-201ENST00000400540 FOLR1P15328 257 aa11.7□□□□□ -0.54
LINC00544-201ENST00000400540 NELFEP18615 380 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms