RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ENPP3O14638 875 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 SLC1A2P43004 574 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 PARP8Q8N3A8 854 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 POP5Q969H6 163 aaKnown RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 ESAMQ96AP7 390 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 HAPLN3Q96S86 360 aa18.05■□□□□ 0.48
COL18A1-204ENST00000400337 TDRD1Q9BXT4 1180 aaKnown RBP18.05■□□□□ 0.48
COL18A1-204ENST00000400337 CAPN8A6NHC0 703 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 TULP2O00295 520 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 OR4F21O95013 312 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 C8AP07357 584 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 UROSP10746 265 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 DBTP11182 482 aaKnown RBP18.04■□□□□ 0.48
COL18A1-204ENST00000400337 NUP62P37198 522 aaPredicted RBP18.04■□□□□ 0.48
COL18A1-204ENST00000400337 GPR107Q5VW38 600 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 RBM44Q6ZP01 1051 aaKnown RBP18.04■□□□□ 0.48
COL18A1-204ENST00000400337 PGAM4Q8N0Y7 254 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 SMYD1Q8NB12 490 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 CMASQ8NFW8 434 aaPredicted RBP18.04■□□□□ 0.48
COL18A1-204ENST00000400337 TTLL2Q9BWV7 592 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 ZDHHC18Q9NUE0 388 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 PCCBP05166 539 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 TAF13Q15543 124 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 FAM182AQ5T1J6 154 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 TMC5Q6UXY8 1006 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 SIAH1Q8IUQ4 282 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 IZUMO1Q8IYV9 350 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 AMER2Q8N7J2 671 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 OR2T34Q8NGX1 318 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 OR2T3Q8NH03 318 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 C2orf15Q8WU43 125 aaKnown RBP18.04■□□□□ 0.48
COL18A1-204ENST00000400337 C3orf14Q9HBI5 128 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 PIGVQ9NUD9 493 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 EIF2B4Q9UI10 523 aaKnown RBP18.04■□□□□ 0.48
COL18A1-204ENST00000400337 CNTN6Q9UQ52 1028 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 COL1A1P02452 1464 aaPredicted RBP18.04■□□□□ 0.48
COL18A1-204ENST00000400337 CCDC85CA6NKD9 419 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 PTPN2P17706 415 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 CYP4F8P98187 520 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 ARHGAP22Q7Z5H3 698 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 MPP5Q8N3R9 675 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 OR14C36Q8NHC7 312 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 NTAN1Q96AB6 310 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 EQTNQ9NQ60 294 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 IDSP22304 550 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 TMEM110Q86TL2 294 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 CNTD1Q8N815 330 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 HEPHQ9BQS7 1158 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 ARL5AQ9Y689 179 aa18.04■□□□□ 0.48
COL18A1-204ENST00000400337 TCRBV7S3A2A0A539 114 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 CCDC189A1A4V9 331 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 NRP1O14786 923 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 PER2O15055 1255 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 XIAPP98170 497 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 PLEKHG4Q58EX7 1191 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 CRYBG2Q8N1P7 616 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 NAT8LQ8N9F0 302 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 FEM1CQ96JP0 617 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 OLFM1Q99784 485 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 CRISPLD1Q9H336 500 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 SPATA2Q9UM82 520 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 TLR6Q9Y2C9 796 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 FPGTO14772 594 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 FFAR2O15552 330 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 ESR1P03372 595 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 GRIA1P42261 906 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 IDH3AP50213 366 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 RPS24P62847 133 aaKnown RBP18.03■□□□□ 0.48
COL18A1-204ENST00000400337 REP15Q6BDI9 236 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 KIAA0930Q6ICG6 404 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-204ENST00000400337 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-204ENST00000400337 KLHL32Q96NJ5 620 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 GTPBP1O00178 669 aaKnown RBP18.03■□□□□ 0.48
COL18A1-204ENST00000400337 IL6P05231 212 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 CAPN1P07384 714 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 ANXA4P09525 319 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-204ENST00000400337 PTGER3P43115 390 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 C2orf80Q0P641 193 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 TAF1AQ15573 450 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-204ENST00000400337 ZNF572Q7Z3I7 529 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-204ENST00000400337 IFNL1Q8IU54 200 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 ADCY4Q8NFM4 1077 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 TEX47Q8TBZ9 253 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 PTGFRNQ9P2B2 879 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 CNOT6Q9ULM6 557 aaKnown RBP18.03■□□□□ 0.48
COL18A1-204ENST00000400337 PCDHGA4Q9Y5G9 962 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 SESN1Q9Y6P5 492 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 LIPEQ05469 1076 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 NCBP2-AS2Q69YL0 99 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 PAOXQ6QHF9 649 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 KREMEN2Q8NCW0 462 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 VANGL1Q8TAA9 524 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-204ENST00000400337 POLR3BQ9NW08 1133 aaPredicted RBP18.03■□□□□ 0.48
COL18A1-204ENST00000400337 SLC17A6Q9P2U8 582 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 PRDM4Q9UKN5 801 aa18.03■□□□□ 0.48
COL18A1-204ENST00000400337 CCNDBP1O95273 360 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 MTHFRP42898 656 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 ASMTP46597 345 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 TAS2R41P59536 307 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms