RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 TXNDC11Q6PKC3 985 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 KRT73Q86Y46 540 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 ARMC8Q8IUR7 673 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 C2orf73Q8N5S3 287 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 CDK15Q96Q40 435 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 CDK5RAP1Q96SZ6 601 aaKnown RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 SLC25A51Q9H1U9 297 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 FBRSL1Q9HCM7 1045 aaKnown RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 OXSMQ9NWU1 459 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 PDP1Q9P0J1 537 aaPredicted RBP10.68□□□□□ -0.7
CCDC40-204ENST00000397545 IGSF9Q9P2J2 1179 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 SLC2A6Q9UGQ3 507 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 ATAD5Q96QE3 1844 aa10.68□□□□□ -0.7
CCDC40-204ENST00000397545 MATN3O15232 486 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 ERAL1O75616 437 aaKnown RBP10.67□□□□□ -0.7
CCDC40-204ENST00000397545 MMP3P08254 477 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 SPATA31D3P0C874 917 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 CCNCP24863 283 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 SLC18A1P54219 525 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 MTTPP55157 894 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 CCL23P55773 120 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 ACAP2Q15057 778 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 INTS11Q5TA45 600 aaKnown RBP10.67□□□□□ -0.7
CCDC40-204ENST00000397545 SPATA31D4Q6ZUB0 917 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 MTSS1LQ765P7 747 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 OR13C4Q8NGS5 318 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 FAR1Q8WVX9 515 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 LRTM1Q9HBL6 345 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 TIMMDC1Q9NPL8 285 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 FBXW11Q9UKB1 542 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 RAI2Q9Y5P3 530 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 ELOVL7A1L3X0 281 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 SNPHO15079 494 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 PRKCGP05129 697 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 IGFBP5P24593 272 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 MOGSQ13724 837 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 NOL9Q5SY16 702 aaKnown RBP10.67□□□□□ -0.7
CCDC40-204ENST00000397545 AADATQ8N5Z0 425 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 ARL10Q8N8L6 244 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 RHBGQ9H310 441 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 MAP10Q9P2G4 905 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 RBPJLQ9UBG7 517 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 EVLQ9UI08 416 aaPredicted RBP10.67□□□□□ -0.7
CCDC40-204ENST00000397545 ERGIC3Q9Y282 383 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 KIAA1217Q5T5P2 1943 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 J3QRK9 145 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 hCG_2039718K7EN88 272 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 SLC28A1O00337 649 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 SUV39H1O43463 412 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 ATP6V1G1O75348 118 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 C22orf31O95567 290 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 C1RP00736 705 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 CTSKP43235 329 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 BNIP3Q12983 259 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 ZNF846Q147U1 533 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 SH3D19Q5HYK7 790 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 RBM20Q5T481 1227 aaKnown RBP10.67□□□□□ -0.7
CCDC40-204ENST00000397545 KIAA0408Q6ZU52 694 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 CHMP1BQ7LBR1 199 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 PROSER1Q86XN7 944 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 PQLC3Q8N755 202 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 FBXL8Q96CD0 374 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 OSBPL6Q9BZF3 934 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 PNPLA8Q9NP80 782 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 DERAQ9Y315 318 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 STYXL1Q9Y6J8 313 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 CITO14578 2027 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 BCKDKO14874 412 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 RFPL1O75677 317 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 POU2F1P14859 743 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 IVDP26440 423 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 PRDX6P30041 224 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 KIR3DL1P43629 444 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 AIF1P55008 147 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 PTSQ03393 145 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 COX10Q12887 443 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 FAM174BQ3ZCQ3 159 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 RAB6CQ53S08 254 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 DENND5AQ6IQ26 1287 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 TAPT1Q6NXT6 567 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 XKR5Q6UX68 686 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 CAND1Q86VP6 1230 aaKnown RBP10.67□□□□□ -0.7
CCDC40-204ENST00000397545 SLC34A3Q8N130 599 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 CYP4Z2PQ8N1L4 340 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 ITCHQ96J02 903 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 BTN2A3PQ96KV6 586 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 NODALQ96S42 347 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 MIPEPQ99797 713 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 NLNQ9BYT8 704 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 PRRG3Q9BZD7 231 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 RAB6CQ9H0N0 254 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 ATP13A3Q9H7F0 1226 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 PREBQ9HCU5 417 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 FKBPLQ9UIM3 349 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 SIX4Q9UIU6 781 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 PADI3Q9ULW8 664 aa10.67□□□□□ -0.7
CCDC40-204ENST00000397545 H0Y858 1186 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 H3BNX3 289 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 ARL4DP49703 201 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 POLR2LP62875 67 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms