RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 SEC24AO95486 1093 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 PAK4O96013 591 aaPredicted RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 CD72P21854 359 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 YAP1P46937 504 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 HPCAP84074 193 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 SMARCB1Q12824 385 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 TRMT5Q32P41 509 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 GRAMD4Q6IC98 578 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 MBOAT1Q6ZNC8 495 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 HEPHQ9BQS7 1158 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 SLC25A23Q9BV35 468 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 WDR6Q9NNW5 1121 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 EQTNQ9NQ60 294 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 TAS2R1Q9NYW7 299 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 ZNF212Q9UDV6 495 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 NCKAP1Q9Y2A7 1128 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 WASF2Q9Y6W5 498 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 RBM47A0AV96 593 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 TP73O15350 636 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 SMAD6O43541 496 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 PSMG1O95456 288 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 ALDOAP04075 364 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 SLC35G4P0C7Q5 338 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 MAPKAPK2P49137 400 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 PAFAH1B3Q15102 231 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 PPP1R15BQ5SWA1 713 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 PRAMEF14Q5SWL7 426 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 LRRC66Q68CR7 880 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 MTSS1LQ765P7 747 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 ARCQ7LC44 396 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 NSUN5Q96P11 429 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 GRIP2Q9C0E4 1043 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 MAF1Q9H063 256 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 DPEP2Q9H4A9 486 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 SUV39H2Q9H5I1 410 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 RNPEPL1Q9HAU8 725 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 CLIC5Q9NZA1 410 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 CNTN6Q9UQ52 1028 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 RGSL1A5PLK6 1076 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 DCLK1O15075 740 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 GSC2O15499 205 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 TIPRLO75663 272 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 RASGRP1O95267 797 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 HSMCR30P0CW71 290 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 ACP5P13686 325 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 NEK3P51956 506 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 PCBP2Q15366 365 aaKnown RBP eCLIP11.06□□□□□ -0.643e-8■■■■■ 34.3
IFT140-202ENST00000397417 SF1Q15637 639 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 KHDC1Q4VXA5 237 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 ZC3H7AQ8IWR0 971 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 TBC1D19Q8N5T2 526 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 LMNTD1Q8N9Z9 388 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 C19orf60Q96EN9 201 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 NSUN3Q9H649 340 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 CTPS2Q9NRF8 586 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 VTI1BQ9UEU0 232 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 ZDHHC2Q9UIJ5 367 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 ZNF711Q9Y462 761 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 NUP214P35658 2090 aaPredicted RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 UNCXA6NJT0 531 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 RGS14O43566 566 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 STK16O75716 305 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 POP4O95707 220 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 AMD1P17707 334 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 TNNI3P19429 210 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 TM4SF4P48230 202 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 SLC34A1Q06495 639 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 TNK2Q07912 1038 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 UBXN2BQ14CS0 331 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 ZBTB6Q15916 424 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 C10orf53Q8N6V4 93 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 CXorf40BQ96DE9 158 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 PPP1R16AQ96I34 528 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 OR52E6Q96RD3 313 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 PANX1Q96RD7 426 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 NR1H4Q96RI1 486 aaPredicted RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 TSPAN18Q96SJ8 248 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 SPATS2LQ9NUQ6 558 aaKnown RBP11.06□□□□□ -0.64
IFT140-202ENST00000397417 PPM1HQ9ULR3 514 aa11.06□□□□□ -0.64
IFT140-202ENST00000397417 HS6ST1O60243 411 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 FAM189A1O60320 539 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 MAFKO60675 156 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 CCT8P50990 548 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 PLA2G16P53816 162 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 SERINC3Q13530 473 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 FGD3Q5JSP0 725 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 SUSD1Q6UWL2 747 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 TSPAN33Q86UF1 283 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 P3H2Q8IVL5 708 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 ACVR1CQ8NER5 493 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 OR2AP1Q8NGE2 309 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 BBS4Q96RK4 519 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 PLAGL1Q9UM63 463 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 ITM2BQ9Y287 266 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 KCNE2Q9Y6J6 123 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 HAS3O00219 553 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 DNAJA2O60884 412 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 CD70P32970 193 aa11.05□□□□□ -0.64
IFT140-202ENST00000397417 MEF2AQ02078 507 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms