RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 A0A0U1RQS6 177 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 BHMG1C9JSJ3 638 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 FZD6O60353 706 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 GADD45BO75293 160 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 UBXN7O94888 489 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 CTPS1P17812 591 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 XRCC1P18887 633 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 STC1P52823 247 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 ART1P52961 327 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 POLR2FP61218 127 aaKnown RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 DPYSQ14117 519 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 ZNF630Q2M218 657 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 HSP90AA4PQ58FG1 418 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 VWA5B1Q5TIE3 1220 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 DCUN1D2Q6PH85 259 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 TMEM26Q6ZUK4 368 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 PRSS42Q7Z5A4 293 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 PPP1R3BQ86XI6 285 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 BBS5Q8N3I7 341 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 ITLN2Q8WWU7 325 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 KLHL6Q8WZ60 621 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 INPP5DQ92835 1189 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 FCRL4Q96PJ5 515 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 AGAP2Q99490 1192 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 BARD1Q99728 777 aaKnown RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 SNRNP25Q9BV90 132 aaKnown RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 RIOK2Q9BVS4 552 aaKnown RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 TMUB1Q9BVT8 246 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 AKIRIN1Q9H9L7 192 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 TMEM63CQ9P1W3 806 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 C5AR2Q9P296 337 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 DNPEPQ9ULA0 475 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 CNOT6Q9ULM6 557 aaKnown RBP9.27□□□□□ -0.93
NEDD9-203ENST00000397378 KCNK6Q9Y257 313 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 PRKAB1Q9Y478 270 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 CCDC88CQ9P219 2028 aa9.27□□□□□ -0.93
NEDD9-203ENST00000397378 CNTRLQ7Z7A1 2325 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 A0A0J9YYE9 177 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 TMEM200CA6NKL6 621 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 E2F3O00716 465 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 MAFKO60675 156 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 SNX2O60749 519 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 RASSF9O75901 435 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 TIAF1O95411 115 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 TRBC1P01850 177 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 ATP1A1P05023 1023 aaKnown RBP9.26□□□□□ -0.93
NEDD9-203ENST00000397378 PDHA1P08559 390 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 STSP08842 583 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 ACP5P13686 325 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 EDN3P14138 238 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 AMD1P17707 334 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 LPOP22079 712 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-203ENST00000397378 EEF1GP26641 437 aaKnown RBP9.26□□□□□ -0.93
NEDD9-203ENST00000397378 MAXP61244 160 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 SYCP1Q15431 976 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 CAMK4Q16566 473 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 TCP11X2Q5H9J9 407 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 PPP6R3Q5H9R7 873 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-203ENST00000397378 CRB2Q5IJ48 1285 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 CYP4V2Q6ZWL3 525 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-203ENST00000397378 MED25Q71SY5 747 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 MRGPRGQ86SM5 289 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 PHYKPLQ8IUZ5 450 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 MCOLN2Q8IZK6 566 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 AOPEPQ8N6M6 819 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 ARFGAP1Q8N6T3 406 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 TMEM102Q8N9M5 508 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-203ENST00000397378 TGM7Q96PF1 710 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 PLEKHG4BQ96PX9 1271 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 PEBP4Q96S96 227 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 CARD9Q9H257 536 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 NLRC4Q9NPP4 1024 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 CWC15Q9P013 229 aaKnown RBP9.26□□□□□ -0.93
NEDD9-203ENST00000397378 SEMA5BQ9P283 1151 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 EPHA6Q9UF33 1036 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 FARSAQ9Y285 508 aaKnown RBP9.26□□□□□ -0.93
NEDD9-203ENST00000397378 PCDHGA10Q9Y5H3 936 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 SLC30A1Q9Y6M5 507 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 FER1L5A0AVI2 2057 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 ANKRD12Q6UB98 2062 aa9.26□□□□□ -0.93
NEDD9-203ENST00000397378 EPHB6O15197 1021 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 KCNN4O15554 427 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 GRID2O43424 1007 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 NUAK1O60285 661 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 RNF8O76064 485 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 VIPP01282 170 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 ALPPP05187 535 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 TYRP1P17643 537 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 NELFEP18615 380 aaKnown RBP9.25□□□□□ -0.93
NEDD9-203ENST00000397378 PSMA2P25787 234 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 SLC19A1P41440 591 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 MMP13P45452 471 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 CAPZBP47756 277 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 KLK7P49862 253 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 RRADP55042 308 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 CDH6P55285 790 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 PDE1BQ01064 536 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 SRSF11Q05519 484 aaKnown RBP9.25□□□□□ -0.93
NEDD9-203ENST00000397378 LAMB3Q13751 1172 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms