RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PTSQ03393 145 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 TUBB3Q13509 450 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 ZYG11AQ6WRX3 759 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 LIPIQ6XZB0 460 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 SLC41A1Q8IVJ1 513 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 WDR75Q8IWA0 830 aaKnown RBP14.78□□□□□ -0.04
CAPN3-207ENST00000397200 MAGEC3Q8TD91 643 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 STYXQ8WUJ0 223 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 PRR11Q96HE9 360 aaPredicted RBP14.78□□□□□ -0.04
CAPN3-207ENST00000397200 GPR78Q96P69 363 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 RAB3IPQ96QF0 476 aaPredicted RBP14.78□□□□□ -0.04
CAPN3-207ENST00000397200 NMUR2Q9GZQ4 415 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 BTBD1Q9H0C5 482 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 SGK2Q9HBY8 427 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 OXSMQ9NWU1 459 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 TLK1Q9UKI8 766 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 DNAJC16Q9Y2G8 782 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 LRRK1Q38SD2 2015 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 MUC3AQ02505 3323 aa14.78□□□□□ -0.04
CAPN3-207ENST00000397200 A0A087X1B8 175 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 CAPN14A8MX76 684 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 PSMD11O00231 422 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 ZNF195O14628 629 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 PHGDHO43175 533 aaKnown RBP14.77□□□□□ -0.04
CAPN3-207ENST00000397200 WISP3O95389 354 aaPredicted RBP14.77□□□□□ -0.04
CAPN3-207ENST00000397200 IGLV3-19P01714 112 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 C1SP09871 688 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 STMN1P16949 149 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 PSMA3P25788 255 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 PTPN4P29074 926 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 ZNF140P52738 457 aaPredicted RBP14.77□□□□□ -0.04
CAPN3-207ENST00000397200 STC1P52823 247 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 ITGA9Q13797 1035 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 TSNAXIP1Q2TAA8 658 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 OR4K2Q8NGD2 314 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 OR13C4Q8NGS5 318 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 STON2Q8WXE9 905 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 EID2BQ96D98 161 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 PREBQ9HCU5 417 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 BPIFA1Q9NP55 256 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 PRMT8Q9NR22 394 aaPredicted RBP14.77□□□□□ -0.04
CAPN3-207ENST00000397200 ARL8BQ9NVJ2 186 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 DNAJC28Q9NX36 388 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 PKD2L2Q9NZM6 624 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 IL17CQ9P0M4 197 aa14.77□□□□□ -0.04
CAPN3-207ENST00000397200 A0A0C4DFX4 3053 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TBC1D3DA0A087WVF3 549 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TBC1D3IA0A087WXS9 549 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TBC1D3EA0A087X179 549 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TBC1D3KA0A087X1G2 549 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TBC1D3FA6NER0 549 aaPredicted RBP14.77□□□□□ -0.05
CAPN3-207ENST00000397200 PRR23AA6NEV1 266 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 LRRC72A6NJI9 287 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TBC1D3LB9A6J9 549 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 AXIN1O15169 862 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 CCDC22O60826 627 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TRIM13O60858 407 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 MMP20O60882 483 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 ATP6V1G2O95670 118 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TBC1D3HP0C7X1 549 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 C6P13671 934 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 CALB2P22676 271 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 ACSL1P33121 698 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TAS2R39P59534 338 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 PTPRCAPQ14761 206 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 ACOX1Q15067 660 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TBCCQ15814 346 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 SNCBQ16143 134 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TMEM31Q5JXX7 168 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TBC1D3GQ6DHY5 549 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TBC1D3CQ6IPX1 549 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 KIAA1161Q6NSJ0 714 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 LRRC8EQ6NSJ5 796 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 RAPH1Q70E73 1250 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 MAVSQ7Z434 540 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 ALYREFQ86V81 257 aaKnown RBP14.77□□□□□ -0.05
CAPN3-207ENST00000397200 CILP2Q8IUL8 1156 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 C1orf210Q8IVY1 113 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 CEP97Q8IW35 865 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 TBC1D3Q8IZP1 549 aaPredicted RBP14.77□□□□□ -0.05
CAPN3-207ENST00000397200 DTWD2Q8NBA8 298 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 GPR150Q8NGU9 434 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 PPP4R1Q8TF05 950 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 NSL1Q96IY1 281 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 DNAJC1Q96KC8 554 aaKnown RBP14.77□□□□□ -0.05
CAPN3-207ENST00000397200 NLE1Q9NVX2 485 aaPredicted RBP14.77□□□□□ -0.05
CAPN3-207ENST00000397200 MARCOQ9UEW3 520 aaPredicted RBP14.77□□□□□ -0.05
CAPN3-207ENST00000397200 ACOT9Q9Y305 439 aa14.77□□□□□ -0.05
CAPN3-207ENST00000397200 NUMA1Q14980 2115 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 TRPM6Q9BX84 2022 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 CACNA1IQ9P0X4 2223 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 TK2O00142 265 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 LZTS3O60299 673 aaPredicted RBP14.76□□□□□ -0.05
CAPN3-207ENST00000397200 WFS1O76024 890 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 KLHL2O95198 593 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 SEMA4FO95754 770 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 SERPINA6P08185 405 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 CD6P30203 668 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 HOXA6P31267 233 aa14.76□□□□□ -0.05
CAPN3-207ENST00000397200 RPS21P63220 83 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms