RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 IL26Q9NPH9 171 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 PLEKHM1Q9Y4G2 1056 aa14.39□□□□□ -0.11
SEC13-208ENST00000397109 A0A1W2PQM1 296 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 BHMG1C9JSJ3 638 aaPredicted RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 D6RAR5 112 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 BRINP1O60477 761 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 DXOO77932 396 aaKnown RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 LPOP22079 712 aaPredicted RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 CLCNKAP51800 687 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 GABREP78334 506 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 ITGA9Q13797 1035 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 NR1D2Q14995 579 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 CLPPQ16740 277 aaPredicted RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 P3H1Q32P28 736 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 ATP13A5Q4VNC0 1218 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 SFTPA2Q8IWL1 248 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 KRT222Q8N1A0 295 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 ATG4AQ8WYN0 398 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 C19orf43Q9BQ61 176 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 TBL1YQ9BQ87 522 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 TMEM121Q9BTD3 319 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 STRADBQ9C0K7 418 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 ARNT2Q9HBZ2 717 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 DMGDHQ9UI17 866 aaKnown RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 RAXQ9Y2V3 346 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 PRKAB1Q9Y478 270 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 FREM2Q5SZK8 3169 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 SCN8AQ9UQD0 1980 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 PKD1L2Q7Z442 2459 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 CCDC187A0A096LP49 1063 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 GLYATL1P3A0A0U1RQE8 302 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 FAM187AA6NFU0 413 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 OR5K4A6NMS3 321 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 CHUKO15111 745 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 KMOO15229 486 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 KRT37O76014 449 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 CDK14O94921 469 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 CRTAMO95727 393 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 MPOP05164 745 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 ACP5P13686 325 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 DRG2P55039 364 aaKnown RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 INHBCP55103 352 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 B4GALNT1Q00973 533 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 GTF2H3Q13889 308 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 LDLRAP1Q5SW96 308 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 IGF2-ASQ6U949 168 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 LRRTM4Q86VH4 590 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 AVL9Q8NBF6 648 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 WDR36Q8NI36 951 aaKnown RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 GDAP1Q8TB36 358 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 C1orf54Q8WWF1 131 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 SEC14L1Q92503 715 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 FGF11Q92914 225 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 RTP4Q96DX8 246 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 ATXN7L3BQ96GX2 97 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 LIN37Q96GY3 246 aaPredicted RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 ZNF578Q96N58 590 aaPredicted RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 TTC25Q96NG3 672 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 APOL2Q9BQE5 337 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 ZCCHC2Q9C0B9 1178 aaKnown RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 RAB17Q9H0T7 212 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 STN1Q9H668 368 aaKnown RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 SMARCAL1Q9NZC9 954 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 DRG1Q9Y295 367 aaKnown RBP14.38□□□□□ -0.11
SEC13-208ENST00000397109 PCDHGA8Q9Y5G5 932 aa14.38□□□□□ -0.11
SEC13-208ENST00000397109 KIF26BQ2KJY2 2108 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 ALDH4A1P30038 563 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 CCKBRP32239 447 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 MLLT3P42568 568 aaPredicted RBP14.37□□□□□ -0.11
SEC13-208ENST00000397109 FASLGP48023 281 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 ERVPABLB-1P60509 514 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 TMEM115Q12893 351 aaPredicted RBP14.37□□□□□ -0.11
SEC13-208ENST00000397109 EIF3IQ13347 325 aaKnown RBP14.37□□□□□ -0.11
SEC13-208ENST00000397109 CHRNA6Q15825 494 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 TBC1D25Q3MII6 688 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 ZNF648Q5T619 568 aaPredicted RBP14.37□□□□□ -0.11
SEC13-208ENST00000397109 KCTD11Q693B1 232 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 FAM151BQ6UXP7 276 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 SFRP1Q8N474 314 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 SNIP1Q8TAD8 396 aaKnown RBP14.37□□□□□ -0.11
SEC13-208ENST00000397109 AENQ8WTP8 325 aaKnown RBP14.37□□□□□ -0.11
SEC13-208ENST00000397109 PATE1Q8WXA2 126 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 CAVIN3Q969G5 261 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 TIMM29Q9BSF4 260 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 FAM129AQ9BZQ8 928 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 LRRC40Q9H9A6 602 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 TBC1D29Q9UFV1 150 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 PCYOX1Q9UHG3 505 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 TMPRSS11EQ9UL52 423 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 SATB2Q9UPW6 733 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 KCNK6Q9Y257 313 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 PCYT1BQ9Y5K3 369 aaPredicted RBP14.37□□□□□ -0.11
SEC13-208ENST00000397109 ARL5AQ9Y689 179 aa14.37□□□□□ -0.11
SEC13-208ENST00000397109 COL27A1Q8IZC6 1860 aaPredicted RBP14.37□□□□□ -0.11
SEC13-208ENST00000397109 KIR2DS5A0A0G2JLQ3 304 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 A0A0G2JNG1 304 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 KIR2DS3K7RE56 304 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 PPM1DO15297 605 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 RRP8O43159 456 aaKnown RBP14.36□□□□□ -0.11
SEC13-208ENST00000397109 B4GAT1O43505 415 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms