RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 RLN2P04090 185 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 ARCN1P48444 511 aaKnown RBP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 MARCKSL1P49006 195 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 RGS8P57771 180 aaPredicted RBP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 RAB15P59190 212 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 ACVR2BQ13705 512 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 TUBA3EQ6PEY2 450 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 SERPINA13PQ6UXR4 307 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 OR52J3Q8NH60 311 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CXorf21Q9HAI6 301 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 FKBP7Q9Y680 259 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 KANTRA0A1W2PQU2 76 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CLDN9O95484 217 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 MADCAM1Q13477 382 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CRY2Q49AN0 593 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 ALKBH2Q6NS38 261 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 POF1BQ8WVV4 589 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 DMRTB1Q96MA1 342 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 GAD1Q99259 594 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 COPS8Q99627 209 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 ABHD16BQ9H3Z7 469 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 PCDHB1Q9Y5F3 818 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 NR4A1P22736 598 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 FAM46CQ5VWP2 391 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CMC1Q7Z7K0 106 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CBR4Q8N4T8 237 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 SLC44A1Q8WWI5 657 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 INTS10Q9NVR2 710 aaKnown RBP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 PRDM4Q9UKN5 801 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 SPEF1Q9Y4P9 236 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CD247P20963 164 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CCNHP51946 323 aaPredicted RBP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 ZNF132P52740 706 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 ATXN7L2Q5T6C5 722 aaPredicted RBP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 RANBP3LQ86VV4 465 aaPredicted RBP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 BEND7Q8N7W2 519 aaPredicted RBP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 TOR3AQ9H497 397 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 TBC1D17Q9HA65 648 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 ATG13O75143 517 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 APOL3O95236 402 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CSTF1Q05048 431 aaKnown RBP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 SF1Q15637 639 aaKnown RBP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 RAVER1Q8IY67 606 aaKnown RBP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 AKAP1Q92667 903 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 DHX33Q9H6R0 707 aaKnown RBP13.87□□□□□ -0.19
COL4A3-202ENST00000396578 MATN4O95460 622 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CCR3P51677 355 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CDH13P55290 713 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 TUBA3CQ13748 450 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 GRM3Q14832 879 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 C1orf186Q6ZWK4 172 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CCDC107Q8WV48 283 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 TP53INP1Q96A56 240 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 BRINP2Q9C0B6 783 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 ANKRA2Q9H9E1 313 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 PRELID1Q9Y255 219 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 TRIM17Q9Y577 477 aa13.87□□□□□ -0.19
COL4A3-202ENST00000396578 CPSF4LA6NMK7 179 aaKnown RBP13.86□□□□□ -0.19
COL4A3-202ENST00000396578 KCNU1A8MYU2 1149 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 IFI30P13284 250 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 ADORA2AP29274 412 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 HERC3Q15034 1050 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 ZYG11AQ6WRX3 759 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 PMM1Q92871 262 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 ROPN1LQ96C74 230 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 C5orf34Q96MH7 638 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 OR1I1O60431 355 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 AP2S1P53680 142 aaPredicted RBP13.86□□□□□ -0.19
COL4A3-202ENST00000396578 FMO1Q01740 532 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 RBM20Q5T481 1227 aaKnown RBP13.86□□□□□ -0.19
COL4A3-202ENST00000396578 IDNKQ5T6J7 187 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 ART5Q96L15 291 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 GPATCH1Q9BRR8 931 aaKnown RBP13.86□□□□□ -0.19
COL4A3-202ENST00000396578 PCDHB9Q9Y5E1 797 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 ALG5Q9Y673 324 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 IQGAP1P46940 1657 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 C5orf51A6NDU8 294 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 LRRC10BA6NIK2 292 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 CACNB4O00305 520 aaPredicted RBP13.86□□□□□ -0.19
COL4A3-202ENST00000396578 HDCP19113 662 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 RBM34P42696 430 aaKnown RBP13.86□□□□□ -0.19
COL4A3-202ENST00000396578 AP1S1P61966 158 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 RPL7AP62424 266 aaKnown RBP13.86□□□□□ -0.19
COL4A3-202ENST00000396578 PRR5P85299 388 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 SPERTQ8NA61 448 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 LNX1Q8TBB1 728 aaPredicted RBP13.86□□□□□ -0.19
COL4A3-202ENST00000396578 TSSK3Q96PN8 268 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 SLC22A4Q9H015 551 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 ELAC1Q9H777 363 aaKnown RBP13.86□□□□□ -0.19
COL4A3-202ENST00000396578 TMEM39AQ9NV64 488 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 POLLQ9UGP5 575 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 TLL2Q9Y6L7 1015 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 MAU2Q9Y6X3 613 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 CALCAP01258 141 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 KLHL22Q53GT1 634 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 EARS2Q5JPH6 523 aaKnown RBP13.86□□□□□ -0.19
COL4A3-202ENST00000396578 PRAMEF17Q5VTA0 474 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 MFSD5Q6N075 450 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 C11orf65Q8NCR3 313 aa13.86□□□□□ -0.19
COL4A3-202ENST00000396578 ATP13A4Q4VNC1 1196 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms