RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PITPNM3Q9BZ71 974 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 SLC6A17Q9H1V8 727 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 TFB2MQ9H5Q4 396 aaKnown RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 SYTL2Q9HCH5 934 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 KLHL42Q9P2K6 505 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 K7ESM1 405 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 TSPAN6O43657 245 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 PLRG1O43660 514 aaKnown RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 ITM2AO43736 263 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 RNASEH1O60930 286 aaKnown RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 HOXB2P14652 356 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 FZD5Q13467 585 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 FBXO43Q4G163 708 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 ZCCHC23Q6ZST2 131 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 FAM47EQ6ZV65 393 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 CPLX4Q7Z7G2 160 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 EEF1AKMT1Q8WVE0 214 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 KIAA1191Q96A73 305 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 CCDC68Q9H2F9 335 aa12.57□□□□□ -0.4
TRIM39-204ENST00000396548 ZFR2Q9UPR6 939 aaKnown RBP12.57□□□□□ -0.4
TRIM39-204ENST00000396548 ATG2BQ96BY7 2078 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 TGDSO95455 350 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 PYGLP06737 847 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 RBP1P09455 135 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 MYL2P10916 166 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 MTHFD2P13995 350 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 ATP1B2P14415 290 aaPredicted RBP12.56□□□□□ -0.4
TRIM39-204ENST00000396548 TFEBP19484 476 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 NFKB2Q00653 900 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.56□□□□□ -0.4
TRIM39-204ENST00000396548 HDDC3Q8N4P3 179 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 NKAPQ8N5F7 415 aaKnown RBP12.56□□□□□ -0.4
TRIM39-204ENST00000396548 RPLP0P6Q8NHW5 317 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 INPP5DQ92835 1189 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 GLYATL1Q969I3 302 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 FUBP1Q96AE4 644 aaKnown RBP12.56□□□□□ -0.4
TRIM39-204ENST00000396548 AP2M1Q96CW1 435 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 NUS1Q96E22 293 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 SEC16BQ96JE7 1060 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 FAM107BQ9H098 131 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 A0A1W2PP55 124 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 CCDC189A1A4V9 331 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 SERPINE1P05121 402 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 RALBP11234 206 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 KPNA2P52292 529 aaKnown RBP12.56□□□□□ -0.4
TRIM39-204ENST00000396548 MLF2Q15773 248 aaPredicted RBP12.56□□□□□ -0.4
TRIM39-204ENST00000396548 LIPMQ5VYY2 423 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 ATG16L1Q676U5 607 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 SDE2Q6IQ49 451 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 UGT3A1Q6NUS8 523 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 CCDC63Q8NA47 563 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 GRAMD1AQ96CP6 724 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 TSSK1BQ9BXA7 367 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 PRDM6Q9NQX0 595 aa12.56□□□□□ -0.4
TRIM39-204ENST00000396548 CHRNB1P11230 501 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 ATP6V0D1P61421 351 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 XKR5Q6UX68 686 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 CYHR1Q6ZMK1 362 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 SCYL1Q96KG9 808 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 TSNARE1Q96NA8 513 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 ELAC2Q9BQ52 826 aaKnown RBP12.55□□□□□ -0.4
TRIM39-204ENST00000396548 ALG9Q9H6U8 611 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 KCNK13Q9HB14 408 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 TRMT6Q9UJA5 497 aaKnown RBP12.55□□□□□ -0.4
TRIM39-204ENST00000396548 MID2Q9UJV3 735 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 MMP17Q9ULZ9 603 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 SCML1Q9UN30 329 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 KLK8O60259 260 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 TRIM13O60858 407 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 LILRB5O75023 590 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 AP2A2O94973 939 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 SLC25A14O95258 325 aaPredicted RBP12.55□□□□□ -0.4
TRIM39-204ENST00000396548 CHRM3P20309 590 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 CD72P21854 359 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 GRK2P25098 689 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 AOAHP28039 575 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 CCR7P32248 378 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 PRKAA2P54646 552 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 STX3Q13277 289 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 FGL2Q14314 439 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 TMEM259Q4ZIN3 620 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 LDLRAP1Q5SW96 308 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 PTRHD1Q6GMV3 140 aaKnown RBP12.55□□□□□ -0.4
TRIM39-204ENST00000396548 C6orf89Q6UWU4 347 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 TMPRSS6Q8IU80 811 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 CPNE9Q8IYJ1 553 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 COX14Q96I36 57 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 GATA5Q9BWX5 397 aaPredicted RBP12.55□□□□□ -0.4
TRIM39-204ENST00000396548 THAP1Q9NVV9 213 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 HAO1Q9UJM8 370 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 A8MT66 165 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 H2AFYO75367 372 aaKnown RBP12.55□□□□□ -0.4
TRIM39-204ENST00000396548 ATP5F1P24539 256 aaPredicted RBP12.55□□□□□ -0.4
TRIM39-204ENST00000396548 ZBTB16Q05516 673 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 ZP2Q05996 745 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 CRY1Q16526 586 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 ZNF284Q2VY69 593 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 HABP4Q5JVS0 413 aaKnown RBP12.55□□□□□ -0.4
TRIM39-204ENST00000396548 ZNF648Q5T619 568 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms