RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 MAN1A2O60476 641 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 ATF6P18850 670 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 CAPN3P20807 821 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 NEK2P51955 445 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 USP41Q3LFD5 358 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 PGM2L1Q6PCE3 622 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 AFTPHQ6ULP2 937 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 RETREG3Q86VR2 466 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 SLC22A15Q8IZD6 547 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 GATA6Q92908 595 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 SDCCAG3Q96C92 435 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 FUBP3Q96I24 572 aaKnown RBP eCLIP14.29□□□□□ -0.12
SREBF1-205ENST00000395757 CCDC138Q96M89 665 aa14.29□□□□□ -0.12
SREBF1-205ENST00000395757 NR1H4Q96RI1 486 aaPredicted RBP14.29□□□□□ -0.12
SREBF1-205ENST00000395757 SYCE1LA8MT33 242 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 FBP2O00757 339 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 URODP06132 367 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 UGT2B4P06133 528 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 TUFMP49411 452 aaKnown RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 MGAT3Q09327 533 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 TRAF2Q12933 501 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 LAPTM5Q13571 262 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 NADK2Q4G0N4 442 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 FOXB2Q5VYV0 432 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 CLVS1Q8IUQ0 354 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 IPPKQ9H8X2 491 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 INTS7Q9NVH2 962 aaKnown RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 CNOT6Q9ULM6 557 aaKnown RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 ASB1Q9Y576 335 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 HEMK1Q9Y5R4 338 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 ANKRD66B4E2M5 251 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 CLOCKO15516 846 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 SMAD6O43541 496 aaKnown RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 EOMESO95936 686 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 MMP2P08253 660 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 ATXN1LP0C7T5 689 aaKnown RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 FASP25445 335 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 YBEYP58557 167 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 ESRRGP62508 458 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 LIPEQ05469 1076 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 LCP2Q13094 533 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 GPR17Q13304 367 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 LAPTM4AQ15012 233 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 SERPINA9Q86WD7 417 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 C2orf73Q8N5S3 287 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 PTCD2Q8WV60 388 aaKnown RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 FAM162AQ96A26 154 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 AURKBQ96GD4 344 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 YME1L1Q96TA2 773 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 BBS2Q9BXC9 721 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 ALG2Q9H553 416 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 ZDHHC4Q9NPG8 344 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 EXD2Q9NVH0 621 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 ARL15Q9NXU5 204 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 CFAP97Q9P2B7 532 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 OAZ2O95190 189 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 SLC10A3P09131 477 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 MYCLP1P12525 358 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 RECQLP46063 649 aaPredicted RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 PTGR1Q14914 329 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 CWF19L1Q69YN2 538 aaKnown RBP14.28□□□□□ -0.12
SREBF1-205ENST00000395757 ZFP1Q6P2D0 407 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 TMEM151AQ8N4L1 468 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 CAPNS2Q96L46 248 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 C8orf48Q96LL4 319 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 RIC8BQ9NVN3 520 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 IKZF3Q9UKT9 509 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 PCDHGA7Q9Y5G6 932 aa14.28□□□□□ -0.12
SREBF1-205ENST00000395757 PRR23AA6NEV1 266 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 PTGES3LE9PB15 166 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 H3BNX3 289 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 CPSF4O95639 269 aaKnown RBP14.27□□□□□ -0.12
SREBF1-205ENST00000395757 ZNF682O95780 498 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 ABCB1P08183 1280 aaPredicted RBP14.27□□□□□ -0.12
SREBF1-205ENST00000395757 ITGALP20701 1170 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 HALP42357 657 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 RGS4P49798 205 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 DSC3Q14574 896 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 LIMS2Q7Z4I7 341 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 DNAJB7Q7Z6W7 309 aaPredicted RBP14.27□□□□□ -0.12
SREBF1-205ENST00000395757 SYVN1Q86TM6 617 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 LRRC49Q8IUZ0 686 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 CATSPER1Q8NEC5 780 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 OAZ3Q9UMX2 235 aa14.27□□□□□ -0.12
SREBF1-205ENST00000395757 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 H3BSA7 217 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 SLC22A3O75751 556 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 NTRK1P04629 796 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 GSTA3Q16772 222 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 SZRD1Q7Z422 152 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 DDX53Q86TM3 631 aaKnown RBP14.27□□□□□ -0.13
SREBF1-205ENST00000395757 CMTM8Q8IZV2 173 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 TSPAN14Q8NG11 270 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 MED8Q96G25 268 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 RMND5BQ96G75 393 aaPredicted RBP14.27□□□□□ -0.13
SREBF1-205ENST00000395757 TRIM15Q9C019 465 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 OR2AG2A6NM03 316 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 SEC24AO95486 1093 aa14.27□□□□□ -0.13
SREBF1-205ENST00000395757 YBX1P67809 324 aaKnown RBP14.27□□□□□ -0.13
SREBF1-205ENST00000395757 CCDC80Q76M96 950 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms