RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 NCS1P62166 190 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 CD47Q08722 323 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 KCNAB2Q13303 367 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 ATP6AP1LQ52LC2 224 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 SGO1Q5FBB7 561 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 TAF2Q6P1X5 1199 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 HACD2Q6Y1H2 254 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 ADCK1Q86TW2 530 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 PHYKPLQ8IUZ5 450 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 ZCCHC7Q8N3Z6 543 aaKnown RBP14.19□□□□□ -0.14
CLIP2-203ENST00000395060 C3orf58Q8NDZ4 430 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 RPL3LQ92901 407 aaKnown RBP14.19□□□□□ -0.14
CLIP2-203ENST00000395060 PDE10AQ9Y233 779 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 SOBPA7XYQ1 873 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 BTN3A1O00481 513 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 SNX2O60749 519 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 MITFO75030 526 aaPredicted RBP14.19□□□□□ -0.14
CLIP2-203ENST00000395060 RHOBTB1O94844 696 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 OR4F21O95013 312 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 FTH1P02794 183 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 FCGR1AP12314 374 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 MTHFD2P13995 350 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 LEPRP48357 1165 aaKnown RBP14.19□□□□□ -0.14
CLIP2-203ENST00000395060 PCYT1AP49585 367 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 DAG1Q14118 895 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 PTPRRQ15256 657 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 SF3B4Q15427 424 aaKnown RBP eCLIP14.19□□□□□ -0.145e-9■■■■■ 35
CLIP2-203ENST00000395060 KCNJ8Q15842 424 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 PRMT9Q6P2P2 845 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 TXNDC11Q6PKC3 985 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 BNIPLQ7Z465 357 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 SLC22A16Q86VW1 577 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 CLHC1Q8NHS4 586 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 OSCP1Q8WVF1 389 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLIP2-203ENST00000395060 GAD1Q99259 594 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 AMBRA1Q9C0C7 1298 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 GIN1Q9NXP7 522 aa14.19□□□□□ -0.14
CLIP2-203ENST00000395060 CCL15-CCL14A0A0B4J2E2 113 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 PSMD11O00231 422 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 GPR39O43194 453 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 SLC2A3P11169 496 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 CCNCP24863 283 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 TMBIM6P55061 237 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 CHRNB3Q05901 458 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 NKG7Q16617 165 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 FSCN1Q16658 493 aaKnown RBP14.18□□□□□ -0.14
CLIP2-203ENST00000395060 CCL15Q16663 113 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 CLIP4Q8N3C7 705 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 OR10A6Q8NH74 314 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 PSMG2Q969U7 264 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 EXOC2Q96KP1 924 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 SLC9A7Q96T83 725 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 SPC25Q9HBM1 224 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 PAK1IP1Q9NWT1 392 aaPredicted RBP14.18□□□□□ -0.14
CLIP2-203ENST00000395060 GPR45Q9Y5Y3 372 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 NUP214P35658 2090 aaPredicted RBP14.18□□□□□ -0.14
CLIP2-203ENST00000395060 GOLGA8CPA6NN73 597 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 AP3B1O00203 1094 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 SNAI1O95863 264 aaPredicted RBP14.18□□□□□ -0.14
CLIP2-203ENST00000395060 IDO1P14902 403 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 SMPD1P17405 629 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 TCEA1P23193 301 aaKnown RBP14.18□□□□□ -0.14
CLIP2-203ENST00000395060 CDKN1CP49918 316 aaPredicted RBP14.18□□□□□ -0.14
CLIP2-203ENST00000395060 DMPKQ09013 629 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 RNF19BQ6ZMZ0 732 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 NANOGNBQ7Z5D8 188 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 SYVN1Q86TM6 617 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 FAM126BQ8IXS8 530 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 PHACTR4Q8IZ21 702 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 OR7A2PQ8NGA2 310 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 OR52B6Q8NGF0 335 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 GPR152Q8TDT2 470 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 CAPSLQ8WWF8 208 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 MYLPFQ96A32 169 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 GDAP2Q9NXN4 497 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 EIF2B4Q9UI10 523 aaKnown RBP14.18□□□□□ -0.14
CLIP2-203ENST00000395060 ZMYM5Q9UJ78 669 aa14.18□□□□□ -0.14
CLIP2-203ENST00000395060 CCDC162PA2VCL2 907 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 TBC1D4O60343 1298 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 DFNA5O60443 496 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 DEAF1O75398 565 aaPredicted RBP14.17□□□□□ -0.14
CLIP2-203ENST00000395060 DIRAS1O95057 198 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 ALPLP05186 524 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 NR4A2P43354 598 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 HTR6P50406 440 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 TSPY1Q01534 308 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 SCAPQ12770 1279 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 TRIM32Q13049 653 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 SIRPB2Q5JXA9 342 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 C6orf141Q5SZD1 244 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 ALKAL1Q6UXT8 129 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 CALML6Q8TD86 181 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 HMCESQ96FZ2 354 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 AURKBQ96GD4 344 aaPredicted RBP14.17□□□□□ -0.14
CLIP2-203ENST00000395060 HGH1Q9BTY7 390 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 ATP13A3Q9H7F0 1226 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 CNGB3Q9NQW8 809 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 PTGESO14684 152 aa14.17□□□□□ -0.14
CLIP2-203ENST00000395060 CPNE6O95741 557 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms