RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 FOLR1P15328 257 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 SERPINB6P35237 376 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 PTGIRP43119 386 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 TUBB3Q13509 450 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 KCNAB1Q14722 419 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 QPCTQ16769 361 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 IRGCQ6NXR0 463 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 PPP1R2P3Q6NXS1 205 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 JMJD6Q6NYC1 403 aaPredicted RBP15.55■□□□□ 0.08
SNCA-205ENST00000394991 CERS6Q6ZMG9 384 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 SYVN1Q86TM6 617 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 TICAM1Q8IUC6 712 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 PRR7Q8TB68 274 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 SEC14L1Q92503 715 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 EID2BQ96D98 161 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 SLC41A2Q96JW4 573 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 ERGIC2Q96RQ1 377 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 GPR87Q9BY21 358 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 MFRPQ9BY79 579 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 PCDH9Q9HC56 1237 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 SLC40A1Q9NP59 571 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 POT1Q9NUX5 634 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 PKD2L2Q9NZM6 624 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 SEMA5BQ9P283 1151 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 EPHA6Q9UF33 1036 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 LIMA1Q9UHB6 759 aaKnown RBP15.55■□□□□ 0.08
SNCA-205ENST00000394991 RARRES3Q9UL19 164 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 DNAJC16Q9Y2G8 782 aa15.55■□□□□ 0.08
SNCA-205ENST00000394991 CSMD1Q96PZ7 3565 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 CEACAM4O75871 244 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 MTA2O94776 668 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 ZNF7P17097 686 aaPredicted RBP15.54■□□□□ 0.08
SNCA-205ENST00000394991 IL4RP24394 825 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 RPL26P61254 145 aaKnown RBP15.54■□□□□ 0.08
SNCA-205ENST00000394991 CHRNA6Q15825 494 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 INSCQ1MX18 579 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 TDRD12Q587J7 1177 aaKnown RBP15.54■□□□□ 0.08
SNCA-205ENST00000394991 ALS2CLQ60I27 953 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 SLC6A19Q695T7 634 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 ABRAXAS1Q6UWZ7 409 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 ZNF547Q8IVP9 402 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 SIDT2Q8NBJ9 832 aaKnown RBP15.54■□□□□ 0.08
SNCA-205ENST00000394991 ADAMTS17Q8TE56 1095 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 ZNF653Q96CK0 615 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 ZDHHC12Q96GR4 267 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 RAB33BQ9H082 229 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 TRIM39Q9HCM9 518 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 PDE7BQ9NP56 450 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 RPL26L1Q9UNX3 145 aaKnown RBP15.54■□□□□ 0.08
SNCA-205ENST00000394991 ZNF451Q9Y4E5 1061 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 TTLL3Q9Y4R7 772 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 FER1L5A0AVI2 2057 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 MDC1Q14676 2089 aaKnown RBP15.54■□□□□ 0.08
SNCA-205ENST00000394991 CROCCQ5TZA2 2017 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 CCDC88CQ9P219 2028 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 C2CD3Q4AC94 2353 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 POLEQ07864 2286 aa15.54■□□□□ 0.08
SNCA-205ENST00000394991 RGSL1A5PLK6 1076 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 SLC25A14O95258 325 aaPredicted RBP15.53■□□□□ 0.08
SNCA-205ENST00000394991 FTLP02792 175 aaPredicted RBP15.53■□□□□ 0.08
SNCA-205ENST00000394991 HLA-DQB2P05538 268 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 EBLN1P0CF75 366 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 RPL10P27635 214 aaKnown RBP15.53■□□□□ 0.08
SNCA-205ENST00000394991 UBXN1Q04323 297 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 GALNT2Q10471 571 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 MMRN1Q13201 1228 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 KHDC1Q4VXA5 237 aaKnown RBP15.53■□□□□ 0.08
SNCA-205ENST00000394991 BOLA3Q53S33 107 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 ANKRD20A8PQ5CZ79 823 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 ZNF569Q5MCW4 686 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 APTXQ7Z2E3 356 aaKnown RBP15.53■□□□□ 0.08
SNCA-205ENST00000394991 RBMXL3Q8N7X1 1067 aaKnown RBP15.53■□□□□ 0.08
SNCA-205ENST00000394991 GPR26Q8NDV2 337 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 LRRN4Q8WUT4 740 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 C19orf60Q96EN9 201 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 FCRL4Q96PJ5 515 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 TIMM29Q9BSF4 260 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 NUDT9Q9BW91 350 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 SPATA16Q9BXB7 569 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 SLC29A3Q9BZD2 475 aa15.53■□□□□ 0.08
SNCA-205ENST00000394991 RBM22Q9NW64 420 aaKnown RBP eCLIP15.53■□□□□ 0.08
SNCA-205ENST00000394991 FARSAQ9Y285 508 aaKnown RBP15.53■□□□□ 0.08
SNCA-205ENST00000394991 KMOO15229 486 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 MATN3O15232 486 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 KRT86O43790 486 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 MTX2O75431 263 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 MMP2P08253 660 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 CD48P09326 243 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 CCDC172P0C7W6 258 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 CA4P22748 312 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 TNFRSF8P28908 595 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 DRG2P55039 364 aaKnown RBP15.52■□□□□ 0.08
SNCA-205ENST00000394991 RPS15P62841 145 aaKnown RBP15.52■□□□□ 0.08
SNCA-205ENST00000394991 SLC25A11Q02978 314 aaKnown RBP15.52■□□□□ 0.08
SNCA-205ENST00000394991 GPS2Q13227 327 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 CYB5D1Q6P9G0 228 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 LRRTM4Q86VH4 590 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 LRRC49Q8IUZ0 686 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 FDCSPQ8NFU4 85 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 GPR150Q8NGU9 434 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms