RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 DGKKQ5KSL6 1271 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 CXorf57Q6NSI4 855 aaKnown RBP15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 NKAPQ8N5F7 415 aaKnown RBP15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 PCYOX1LQ8NBM8 494 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 OR56A4Q8NGH8 313 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 GBP5Q96PP8 586 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 SLC24A3Q9HC58 644 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 GRM6O15303 877 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 FFAR2O15552 330 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 COL6A2P12110 1019 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 ME2P23368 584 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 GRM2Q14416 872 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 GPRIN3Q6ZVF9 776 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 CYS1Q717R9 158 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 BEND5Q7L4P6 421 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 ANKRD46Q86W74 232 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 TSSK3Q96PN8 268 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 FAM126AQ9BYI3 521 aaPredicted RBP15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 SUV39H2Q9H5I1 410 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 ELOVL6Q9H5J4 265 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 APPL1Q9UKG1 709 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 PSMD13Q9UNM6 376 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 CFAP20Q9Y6A4 193 aaKnown RBP15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 CCDC189A1A4V9 331 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 ABCB1P08183 1280 aaPredicted RBP15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 SNRPB2P08579 225 aaKnown RBP15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 CCR2P41597 374 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 PRKG2Q13237 762 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 KRT72Q14CN4 511 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 SETMARQ53H47 684 aaPredicted RBP15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 SNX19Q92543 992 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 ZBTB18Q99592 522 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 BRD9Q9H8M2 597 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 DNAJC28Q9NX36 388 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 DUS2Q9NX74 493 aaKnown RBP15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 GMPR2Q9P2T1 348 aaKnown RBP15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 B4GALT6Q9UBX8 382 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 SCOCQ9UIL1 159 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 CROTQ9UKG9 612 aa15.74■□□□□ 0.11
SMARCD1-202ENST00000394963 GRID2O43424 1007 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 NCK1P16333 377 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 SEC13P55735 322 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 GPR156Q8NFN8 814 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 OR6Y1Q8NGX8 325 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 RDH11Q8TC12 318 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 MGME1Q9BQP7 344 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 VCXQ9H320 206 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 BCAP29Q9UHQ4 241 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 CAPN8A6NHC0 703 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 NPIPB15A6NHN6 443 aaPredicted RBP15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 SMNDC1O75940 238 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 PARNO95453 639 aaKnown RBP15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 ELFN1P0C7U0 828 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 HSPA8P11142 646 aaKnown RBP15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 LBPP18428 481 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 CASP9P55211 416 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 TBCCQ15814 346 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 CTC1Q2NKJ3 1217 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 RAET1GQ6H3X3 334 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 RBFAQ8N0V3 343 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 TBX21Q9UL17 535 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 NEU3Q9UQ49 428 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 ARIH1Q9Y4X5 557 aaPredicted RBP15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 POLR3HQ9Y535 204 aaPredicted RBP15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 CD1DP15813 335 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 PEX2P28328 305 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 ETV3P41162 512 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 MAPRE2Q15555 327 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 KRT80Q6KB66 452 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 FLCNQ8NFG4 579 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 FOXJ1Q92949 421 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 C3orf30Q96M34 536 aa15.73■□□□□ 0.11
SMARCD1-202ENST00000394963 CDK14O94921 469 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 GSRP00390 522 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 EPHX1P07099 455 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 IMPDH1P20839 514 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 MAT2AP31153 395 aaKnown RBP15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 PRKAA2P54646 552 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 KLC1Q07866 573 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 PPP1R8Q12972 351 aaKnown RBP15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 OTUD3Q5T2D3 398 aaPredicted RBP15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 PGBD3Q8N328 593 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 SLC43A3Q8NBI5 491 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 TMEM159Q96B96 161 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 LOC285095A0A1B0GVY8 99 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 LEFTY1O75610 366 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 WDR47O94967 919 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 ATP5BP06576 529 aaKnown RBP15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 DGKQP52824 942 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 HERVK_113P63132 956 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 CACNG1Q06432 222 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 UNC50Q53HI1 259 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 C2orf27AQ580R0 203 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 UBE2R2Q712K3 238 aaPredicted RBP15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 KDM1BQ8NB78 822 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 SELENOMQ8WWX9 145 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 ECSITQ9BQ95 431 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 ERVK-6Q9BXR3 956 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 SDHDO14521 159 aa15.72■□□□□ 0.11
SMARCD1-202ENST00000394963 F11P03951 625 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms