RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 SCHIP1Q9P0W5 487 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 SLC23A2Q9UGH3 650 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 HEY1Q9Y5J3 304 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 RPS6KL1Q9Y6S9 549 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 NAV2Q8IVL1 2488 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 RELNP78509 3460 aa17.22■□□□□ 0.35
SNRPA1-202ENST00000394082 GOLGA6L19H0YKK7 550 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 APOL1O14791 398 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 NDST3O95803 873 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 BPIP17213 487 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 TCN2P20062 427 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 OAS2P29728 719 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 HMGCLP35914 325 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 GFERP55789 205 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 AP1B1Q10567 949 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 SEPT6Q14141 434 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 TEX44Q53QW1 395 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 ZDHHC20Q5W0Z9 365 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 CCDC70Q6NSX1 233 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 ZNF547Q8IVP9 402 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 TRIM48Q8IWZ4 208 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 UNC5BQ8IZJ1 945 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 BRSK1Q8TDC3 778 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 KLHL6Q8WZ60 621 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 DNAJC7Q99615 494 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 MAK16Q9BXY0 300 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 PACSIN1Q9BY11 444 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 ULBP3Q9BZM4 244 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 EPN3Q9H201 632 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 TRABDQ9H4I3 376 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 SEMA5BQ9P283 1151 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 KLHL3Q9UH77 587 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 SHOC2Q9UQ13 582 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 PCDHB3Q9Y5E6 796 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 SLC30A1Q9Y6M5 507 aa17.21■□□□□ 0.35
SNRPA1-202ENST00000394082 CDK14O94921 469 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 EPOP01588 193 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 TPM3P06753 285 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 PRKAR1AP10644 381 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 FGF5P12034 268 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 BRAFP15056 766 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 AMD1P17707 334 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 VCLP18206 1134 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 IDSP22304 550 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 CAPZBP47756 277 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 NR2C2P49116 596 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 FOXK1P85037 733 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 MESDQ14696 234 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 ALS2CLQ60I27 953 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 CRTC3Q6UUV7 619 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 C6orf15Q6UXA7 325 aaPredicted RBP17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 BZW1Q7L1Q6 419 aaKnown RBP17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 C11orf96Q7Z7L8 435 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 PTRH1Q86Y79 214 aaKnown RBP17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 RHOT2Q8IXI1 618 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 OR8K1Q8NGG5 319 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 SLC35G2Q8TBE7 412 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 ZDHHC12Q96GR4 267 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 AGAP3Q96P47 875 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 FCRL4Q96PJ5 515 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 GLOD4Q9HC38 313 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 IFNKQ9P0W0 207 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 PCDHGA6Q9Y5G7 932 aa17.2■□□□□ 0.34
SNRPA1-202ENST00000394082 A0A0A6YYK5 440 aaPredicted RBP17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 SYCE3A1L190 88 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 PDZK1P1A8MUH7 402 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 SLC1A1P43005 524 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 SRSF1Q07955 248 aaKnown RBP eCLIP17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 FOXM1Q08050 763 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 DMPKQ09013 629 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 TRIM14Q14142 442 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 COLEC12Q5KU26 742 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 ZNF648Q5T619 568 aaPredicted RBP17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 BPHLQ86WA6 291 aaPredicted RBP17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 ABHD17AQ96GS6 310 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 TEKT5Q96M29 485 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 TGM7Q96PF1 710 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 ARFGAP3Q9NP61 516 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 DDX56Q9NY93 547 aaKnown RBP17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 KCND3Q9UK17 655 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 KCNMB2Q9Y691 235 aa17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 DNMT3AQ9Y6K1 912 aaPredicted RBP17.19■□□□□ 0.34
SNRPA1-202ENST00000394082 ZNF106Q9H2Y7 1883 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 LOC285095A0A1B0GVY8 99 aa17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 CYSRT1A8MQ03 144 aa17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 MT-ND3P03897 115 aa17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 PIRTP0C851 137 aa17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 TYRP1P17643 537 aa17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 TMEM115Q12893 351 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 PRKD1Q15139 912 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 TCEAL1Q15170 157 aa17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 SKIDA1Q1XH10 827 aa17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 DEFB109BQ30KR1 87 aa17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 LACTB2Q53H82 288 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 OR6C1Q96RD1 312 aa17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 CEP41Q9BYV8 373 aa17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 DEF6Q9H4E7 631 aa17.18■□□□□ 0.34
SNRPA1-202ENST00000394082 TMPRSS11EQ9UL52 423 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms