RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 ZNF648Q5T619 568 aaPredicted RBP17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 AGAP9Q5VTM2 703 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 CRTC3Q6UUV7 619 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 RAPGEF5Q92565 580 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 TADA1Q96BN2 335 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 TGM7Q96PF1 710 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 VPS35Q96QK1 796 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 GPR63Q9BZJ6 419 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 RAB33BQ9H082 229 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 SLC25A51Q9H1U9 297 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 EPHA6Q9UF33 1036 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 KCND3Q9UK17 655 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 SHOC2Q9UQ13 582 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 KCNMB2Q9Y691 235 aa17.6■□□□□ 0.41
RPUSD3-201ENST00000383820 CLEC18AA5D8T8 446 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 PDZK1P1A8MUH7 402 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 CDK14O94921 469 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 FGF5P12034 268 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 ZNF28P17035 718 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 VCLP18206 1134 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 IDSP22304 550 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 F8A1P23610 371 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 HNRNPH3P31942 346 aaKnown RBP17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 DLSTP36957 453 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 CAPZBP47756 277 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 KLRB1Q12918 225 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 PDK1Q15118 436 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 SLC9A4Q6AI14 798 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 CLEC18BQ6UXF7 455 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 CLEC18CQ8NCF0 446 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 KLHL6Q8WZ60 621 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 STAMBPL1Q96FJ0 436 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 ZDHHC12Q96GR4 267 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 OR6C1Q96RD1 312 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 BRD8Q9H0E9 1235 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 SLC40A1Q9NP59 571 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 CROTQ9UKG9 612 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 HEY1Q9Y5J3 304 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 FLNCQ14315 2725 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 DOPEY2Q9Y3R5 2298 aa17.59■□□□□ 0.41
RPUSD3-201ENST00000383820 LRRD1A4D1F6 860 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 MKRN2OSH3BPM6 223 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 PPP1R12AO14974 1030 aaPredicted RBP17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 KCNJ13O60928 360 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 RASSF9O75901 435 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 NDUFA10O95299 355 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 MT-ND3P03897 115 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 GYPCP04921 128 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 PIRTP0C851 137 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 BRAFP15056 766 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 BPIP17213 487 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 LEPRP48357 1165 aaKnown RBP17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 SEPHS1P49903 392 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 SH3BP2P78314 561 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 AP1B1Q10567 949 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 IGFBP7Q16270 282 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 SLC18A3Q16572 532 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 PLA2G4EQ3MJ16 856 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 ATP1A1-AS1Q5TC04 95 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 CCDC70Q6NSX1 233 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 TCTN3Q6NUS6 607 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 CAVIN1Q6NZI2 390 aaKnown RBP17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 RASGRP3Q8IV61 690 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 ZNF547Q8IVP9 402 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 GALNT6Q8NCL4 622 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 OLFM3Q96PB7 478 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 CBX8Q9HC52 389 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 POLHQ9Y253 713 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 DNAJC16Q9Y2G8 782 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 PCDHGA6Q9Y5G7 932 aa17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 MRPS18BQ9Y676 258 aaKnown RBP17.58■□□□□ 0.4
RPUSD3-201ENST00000383820 APOL1O14791 398 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 KIAA0754O94854 1291 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 NDST3O95803 873 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 CCNYL3P0C7X3 344 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 ZFXP17010 805 aaPredicted RBP17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 SEPT7Q16181 437 aaKnown RBP17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 CACHD1Q5VU97 1274 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 DTX3LQ8TDB6 740 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 BRSK1Q8TDC3 778 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 RSC1A1Q92681 617 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 CXorf40BQ96DE9 158 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 AGAP3Q96P47 875 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 FCRL4Q96PJ5 515 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 MAK16Q9BXY0 300 aaKnown RBP17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 CEP41Q9BYV8 373 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 SEMA5BQ9P283 1151 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 TP53TG5Q9Y2B4 290 aa17.57■□□□□ 0.4
RPUSD3-201ENST00000383820 C3orf70A6NLC5 250 aaPredicted RBP17.56■□□□□ 0.4
RPUSD3-201ENST00000383820 MTX2O75431 263 aa17.56■□□□□ 0.4
RPUSD3-201ENST00000383820 SPAG6O75602 509 aa17.56■□□□□ 0.4
RPUSD3-201ENST00000383820 SLC4A1P02730 911 aa17.56■□□□□ 0.4
RPUSD3-201ENST00000383820 NTRK1P04629 796 aa17.56■□□□□ 0.4
RPUSD3-201ENST00000383820 TMEM253P0C7T8 217 aa17.56■□□□□ 0.4
RPUSD3-201ENST00000383820 NELFEP18615 380 aaKnown RBP17.56■□□□□ 0.4
RPUSD3-201ENST00000383820 RPL10P27635 214 aaKnown RBP17.56■□□□□ 0.4
RPUSD3-201ENST00000383820 HALP42357 657 aa17.56■□□□□ 0.4
RPUSD3-201ENST00000383820 TMEM115Q12893 351 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms