RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TEKT4Q8WW24 435 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 MAML1Q92585 1016 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 AKIRIN1Q9H9L7 192 aaPredicted RBP17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 UCK1Q9HA47 277 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 PDE7BQ9NP56 450 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 CASS4Q9NQ75 786 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 HAUS2Q9NVX0 235 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 ANO10Q9NW15 660 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 ANAPC7Q9UJX3 599 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 RARRES3Q9UL19 164 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 MYO6Q9UM54 1294 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 MED13Q9UHV7 2174 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 SHANK1Q9Y566 2161 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 UNC79Q9P2D8 2635 aa17.49■□□□□ 0.39
PDLIM4-202ENST00000379018 TOX3O15405 576 aaPredicted RBP17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 MT-ND3P03897 115 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 FGF5P12034 268 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 CES1P23141 567 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 RPL26P61254 145 aaKnown RBP17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 STX1AQ16623 288 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 IFI16Q16666 785 aaKnown RBP17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 PRR30Q53SZ7 412 aaPredicted RBP17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 ALG1LQ6GMV1 187 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 LRRTM4Q86VH4 590 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 LRRC49Q8IUZ0 686 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 SIDT2Q8NBJ9 832 aaKnown RBP17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 CCNYQ8ND76 341 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 GPR26Q8NDV2 337 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 ZDHHC12Q96GR4 267 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 LYSMD1Q96S90 227 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 MFRPQ9BY79 579 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 BRD8Q9H0E9 1235 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 TRIM39Q9HCM9 518 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 ACSS2Q9NR19 701 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 RPL26L1Q9UNX3 145 aaKnown RBP17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 PCDHGA6Q9Y5G7 932 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 ADGRG1Q9Y653 693 aa17.48■□□□□ 0.39
PDLIM4-202ENST00000379018 ANKRD66B4E2M5 251 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 KMOO15229 486 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 FOLR1P15328 257 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 CLCNKAP51800 687 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 ATP13A4Q4VNC1 1196 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 PWWP2BQ6NUJ5 590 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 CERS6Q6ZMG9 384 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 APLFQ8IW19 511 aaPredicted RBP17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 EID2BQ96D98 161 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 NUP85Q9BW27 656 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 HSD3B7Q9H2F3 369 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 ZFYVE1Q9HBF4 777 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 POT1Q9NUX5 634 aa17.47■□□□□ 0.39
PDLIM4-202ENST00000379018 IGHV5-51A0A0C4DH38 117 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 LRRC10BA6NIK2 292 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 C21orf140B9A014 251 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 KCNK1O00180 336 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 JCHAINP01591 159 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 EBLN1P0CF75 366 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 BRAFP15056 766 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 NELFEP18615 380 aaKnown RBP17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 CCNCP24863 283 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 COL8A1P27658 744 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 ARL4DP49703 201 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 MRPL49Q13405 166 aaKnown RBP17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 IL10RAQ13651 578 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 DPYSL3Q14195 570 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 PCSK7Q16549 785 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 EIF2S3LQ2VIR3 472 aaKnown RBP17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 ZFYVE27Q5T4F4 411 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 CPNE8Q86YQ8 564 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 TRAPPC5Q8IUR0 188 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 RAVER1Q8IY67 606 aaKnown RBP17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 GDAP1Q8TB36 358 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 KLHL6Q8WZ60 621 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 GLYATL1Q969I3 302 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 ZSCAN5AQ9BUG6 496 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 ADGRE3Q9BY15 652 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 CEP41Q9BYV8 373 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 THAP2Q9H0W7 228 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 IP6K2Q9UHH9 426 aa17.46■□□□□ 0.39
PDLIM4-202ENST00000379018 RGSL1A5PLK6 1076 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 MMP2P08253 660 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 IDSP22304 550 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 PTPN4P29074 926 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 RPS15P62841 145 aaKnown RBP17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 GBE1Q04446 702 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 PAFAH1B3Q15102 231 aaKnown RBP17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 PLCL1Q15111 1095 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 UGT8Q16880 541 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 KHDC1Q4VXA5 237 aaKnown RBP17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 ZNF787Q6DD87 383 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 CYB5D1Q6P9G0 228 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 TRAM1L1Q8N609 369 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 KCTD6Q8NC69 237 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 PRR7Q8TB68 274 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 MR1Q95460 341 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 TIMM29Q9BSF4 260 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 GPR63Q9BZJ6 419 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 ING2Q9H160 280 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 SLC40A1Q9NP59 571 aa17.45■□□□□ 0.38
PDLIM4-202ENST00000379018 LMBRD1Q9NUN5 540 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms