RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 STK16O75716 305 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 RPLP0P05388 317 aaKnown RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 PWP1Q13610 501 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 CINPQ9BW66 212 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 COG5Q9UP83 839 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 FAM86C2PA6NEL3 165 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 XYLBO75191 536 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 TCN1P20061 433 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 AKAP14Q86UN6 197 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 RAB7BQ96AH8 199 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 LRRIQ1Q96JM4 1722 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 FAM205CA6NFA0 338 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 MANEALQ5VSG8 457 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 PLEKHM3Q6ZWE6 761 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF669Q96BR6 464 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 RMI1Q9H9A7 625 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 CYP4F11Q9HBI6 524 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 HACL1Q9UJ83 578 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 IGSF6O95976 241 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 CYP11A1P05108 521 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 AKR1A1P14550 325 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 BLOC1S3Q6QNY0 202 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 KIF2BQ8N4N8 673 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 SKA2Q8WVK7 121 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 PYURFQ96I23 114 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 COPS8Q99627 209 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 C17orf80Q9BSJ5 609 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF282Q9UDV7 671 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 PIN4Q9Y237 131 aaKnown RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 MED1Q15648 1581 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 RFXANKO14593 260 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 TUSC3Q13454 348 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 KEAP1Q14145 624 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 ARHGEF4Q9NR80 690 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 CATSPERZQ9NTU4 200 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 SEC24AO95486 1093 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 MPIP34949 423 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 KDELC1Q6UW63 502 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 CXXC5Q7LFL8 322 aaKnown RBP4.9□□□□□ -1.63
PCDH9-201ENST00000377861 KCNK18Q7Z418 384 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 TRPM4Q8TD43 1214 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 BRF2Q9HAW0 419 aa4.9□□□□□ -1.63
PCDH9-201ENST00000377861 TRAPPC13A5PLN9 417 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SEC22BO75396 215 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CBX6O95503 412 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 FAM110CQ1W6H9 321 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 ERMP1Q7Z2K6 904 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 UBE2Q1Q7Z7E8 422 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 TPRA1Q86W33 373 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 UBR7Q8N806 425 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 RFWD2Q8NHY2 731 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 GPRC5BQ9NZH0 403 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 IPPQ9Y573 584 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CNPP09543 421 aaKnown RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 HGFP14210 728 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SUZ12Q15022 739 aaKnown RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 OVOS1Q6IE37 1185 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 ACOT1Q86TX2 421 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CCM2Q9BSQ5 444 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 UNKLQ9H9P5 680 aaKnown RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 IL20Q9NYY1 176 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 RPS17P08708 135 aaKnown RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 RAG2P55895 527 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PLEKHG4Q58EX7 1191 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 C9orf57Q5W0N0 161 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CLEC4DQ8WXI8 215 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PCDHB18PQ96TA0 734 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 TM9SF2Q99805 663 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 A0A1W2PRB8 838 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 RPS5P46782 204 aaKnown RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 EIPR1Q53HC9 387 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 HABP4Q5JVS0 413 aaKnown RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PGBD3Q8N328 593 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 HJURPQ8NCD3 748 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 KIAA1143Q96AT1 154 aaPredicted RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PTPRHQ9HD43 1115 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 MED17Q9NVC6 651 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 A0A0J9YYE9 177 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 AP3D1O14617 1153 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PRR5P85299 388 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CLCQ05315 142 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 C2orf80Q0P641 193 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 FRMD7Q6ZUT3 714 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 FAM196BA6NMK8 535 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 H3BNH8 94 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PDCD5O14737 125 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 WNT3AP56704 352 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 MID1IP1Q9NPA3 183 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 FZD10Q9ULW2 581 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SMIM28A0A1B0GU29 152 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CYCSP99999 105 aaKnown RBP4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SP4Q02446 784 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 PLEKHS1Q5SXH7 462 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CPTPQ5TA50 214 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 SLCO5A1Q9H2Y9 848 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 LIMD1Q9UGP4 676 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 EPHB6O15197 1021 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 GRIK4Q16099 956 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF767PQ75MW2 155 aa4.89□□□□□ -1.63
PCDH9-201ENST00000377861 CCDC185Q8N715 623 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms