RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 SNAP29O95721 258 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 G6PDP11413 515 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 CSRP3P50461 194 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 ACLYP53396 1101 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 YBEYP58557 167 aaPredicted RBP12.8□□□□□ -0.36
USP11-204ENST00000377107 C16orf72Q14CZ0 275 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 AP5B1Q2VPB7 878 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 AFMIDQ63HM1 303 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 GLYATQ6IB77 296 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 RIN3Q8TB24 985 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 KIAA1191Q96A73 305 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 L3HYPDHQ96EM0 354 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 NSMCE3Q96MG7 304 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 HOPXQ9BPY8 73 aaPredicted RBP12.8□□□□□ -0.36
USP11-204ENST00000377107 NSUN3Q9H649 340 aaKnown RBP12.8□□□□□ -0.36
USP11-204ENST00000377107 PREBQ9HCU5 417 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 RIC8BQ9NVN3 520 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 PTTG2Q9NZH5 202 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 A0A1W2PQ67 120 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 SLC38A8A6NNN8 435 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 ASLP04424 464 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 C8BP07358 591 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 MBL2P11226 248 aaPredicted RBP12.8□□□□□ -0.36
USP11-204ENST00000377107 MZF1P28698 734 aaPredicted RBP12.8□□□□□ -0.36
USP11-204ENST00000377107 OR4D2P58180 307 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 TRAP1Q12931 704 aaKnown RBP12.8□□□□□ -0.36
USP11-204ENST00000377107 CDH18Q13634 790 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 MBTPS1Q14703 1052 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 PCSK9Q8NBP7 692 aaKnown RBP12.8□□□□□ -0.36
USP11-204ENST00000377107 THAP11Q96EK4 314 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 SCLYQ96I15 445 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 FUBP3Q96I24 572 aaKnown RBP eCLIP12.8□□□□□ -0.36
USP11-204ENST00000377107 CIPCQ9C0C6 399 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 CLPBQ9H078 707 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 TFB2MQ9H5Q4 396 aaKnown RBP12.8□□□□□ -0.36
USP11-204ENST00000377107 CD300AQ9UGN4 299 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 LIMD1Q9UGP4 676 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 CDC14AQ9UNH5 594 aa12.8□□□□□ -0.36
USP11-204ENST00000377107 TBL1XO60907 577 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 PRAMEF12O95522 483 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 ALBP02768 609 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 STT3AP46977 705 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 INHBCP55103 352 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 MERTKQ12866 999 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 EIF4EBP2Q13542 120 aaPredicted RBP12.79□□□□□ -0.36
USP11-204ENST00000377107 PTGR1Q14914 329 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 CPSF6Q16630 551 aaKnown RBP eCLIP12.79□□□□□ -0.36
USP11-204ENST00000377107 LYSMD3Q7Z3D4 306 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 ANKRD46Q86W74 232 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 CHERPQ8IWX8 916 aaKnown RBP12.79□□□□□ -0.36
USP11-204ENST00000377107 FIBCD1Q8N539 461 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 ROPN1LQ96C74 230 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 CHID1Q9BWS9 393 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 ADGRE3Q9BY15 652 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 ASB8Q9H765 288 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 EXD2Q9NVH0 621 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 EBF1Q9UH73 591 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.79□□□□□ -0.36
USP11-204ENST00000377107 TCRBV3S1A0A5B6 114 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 ANKRD66B4E2M5 251 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 TMX2-CTNND1H3BSU7 103 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 LRATO95237 230 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 PDCD11Q14690 1871 aaKnown RBP12.79□□□□□ -0.36
USP11-204ENST00000377107 NANOGP8Q6NSW7 305 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 MBOAT1Q6ZNC8 495 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 DET1Q7L5Y6 550 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 OR2T11Q8NH01 316 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 AUTS2Q8WXX7 1259 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 BOCQ9BWV1 1114 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 TNKS2Q9H2K2 1166 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 ZNF696Q9H7X3 374 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 IPPKQ9H8X2 491 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 NANOGQ9H9S0 305 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 C1orf232A0A0U1RR37 186 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 PRRG1O14668 218 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 MAN1A2O60476 641 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 ADAMTS4O75173 837 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 HOXD9P28356 352 aaPredicted RBP12.79□□□□□ -0.36
USP11-204ENST00000377107 TIAL1Q01085 375 aaKnown RBP eCLIP12.79□□□□□ -0.36
USP11-204ENST00000377107 PRKG2Q13237 762 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 SLC44A4Q53GD3 710 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 HECTD3Q5T447 861 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 TMCO2Q7Z6W1 182 aaPredicted RBP12.79□□□□□ -0.36
USP11-204ENST00000377107 TICAM1Q8IUC6 712 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 NKAPQ8N5F7 415 aaKnown RBP12.79□□□□□ -0.36
USP11-204ENST00000377107 WBP2Q969T9 261 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 C9orf16Q9BUW7 83 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 OLAHQ9NV23 265 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 CRLS1Q9UJA2 301 aa12.79□□□□□ -0.36
USP11-204ENST00000377107 LEF1Q9UJU2 399 aaPredicted RBP12.79□□□□□ -0.36
USP11-204ENST00000377107 C2orf78A6NCI8 922 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 MAGEB3O15480 346 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 NOBOXO60393 691 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 NOL3O60936 208 aaKnown RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 SEC22BO75396 215 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 TMCC1O94876 653 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 CDH2P19022 906 aaPredicted RBP12.78□□□□□ -0.36
USP11-204ENST00000377107 DNAJB1P25685 340 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 HOXC8P31273 242 aa12.78□□□□□ -0.36
USP11-204ENST00000377107 ALDH7A1P49419 539 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms