RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 NSMCE3Q96MG7 304 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 TNFRSF11BO00300 401 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 PAPSS2O95340 614 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ZC3H3Q8IXZ2 948 aaKnown RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ASCC1Q8N9N2 400 aaKnown RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 TTC29Q8NA56 475 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ACO2Q99798 780 aaKnown RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 PRDM12Q9H4Q4 367 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 MYH11P35749 1972 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 MAGEB17A8MXT2 336 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 H3BNH8 94 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 SLC28A2O43868 658 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ATP5C1P36542 298 aaKnown RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 GRM5P41594 1212 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 PTGER3P43115 390 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ABATP80404 500 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 MOGSQ13724 837 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 EFR3AQ14156 821 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 TIGD6Q17RP2 521 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ZDHHC7Q9NXF8 308 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF214Q9UL59 606 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 COL5A2P05997 1499 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 A0A0G2JLW4 131 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 H0YGN5 161 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 GATBO75879 557 aaKnown RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 C8GP07360 202 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 NFICP08651 508 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 IMPDH1P20839 514 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 FGL1Q08830 312 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 DPYSL2Q16555 572 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 EPGNQ6UW88 154 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 CHSY3Q70JA7 882 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 NAT8LQ8N9F0 302 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ATG4CQ96DT6 458 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 USP29Q9HBJ7 922 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 NFS1Q9Y697 457 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 CNTNAP2Q9UHC6 1331 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 NALCNQ8IZF0 1738 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 A0A1W2PPM1 405 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 SLC2A2P11168 524 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 NRIP1P48552 1158 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 BIKQ13323 160 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 LSAMPQ13449 338 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 EIPR1Q53HC9 387 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ZDHHC24Q6UX98 284 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 COL21A1Q96P44 957 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 HHATLQ9HCP6 504 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 SIRPGQ9P1W8 387 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF37AP17032 561 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 LARS2Q15031 903 aaKnown RBP10.11□□□□□ -0.79
PTCH1-204ENST00000375290 BTN2A3PQ96KV6 586 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 GTF2IRD1Q9UHL9 959 aa10.11□□□□□ -0.79
PTCH1-204ENST00000375290 CBX4O00257 560 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 FBP2O00757 339 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 ITM2AO43736 263 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 SOX30O94993 753 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 RPL7AP62424 266 aaKnown RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 ADAM15Q13444 863 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 PWP1Q13610 501 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 ADGRA1Q86SQ6 560 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 SLC34A3Q8N130 599 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 XRN1Q8IZH2 1706 aaKnown RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 H7C2Y5 167 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 KLRC2P26717 231 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 MAPK3P27361 379 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 EFEMP1Q12805 493 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 IQSEC1Q6DN90 963 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 OXR1Q8N573 874 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 OR8J3Q8NGG0 315 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 MRI1Q9BV20 369 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 COG5Q9UP83 839 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 ARL6IP5O75915 188 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 UNGP13051 313 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 L1CAMP32004 1257 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 AP5B1Q2VPB7 878 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 TIGD4Q8IY51 512 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 NPAS2Q99743 824 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 MAN1C1Q9NR34 630 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 LINC00854A0A1B0GVQ3 168 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 A0A1W2PP18 115 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 HLA-DPB1P04440 258 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 CCNYL3P0C7X3 344 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 PTPN1P18031 435 aaKnown RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 MTAPQ13126 283 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 IL17AQ16552 155 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 ZIK1Q3SY52 487 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 HDAC10Q969S8 669 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 ABI2Q9NYB9 513 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 SLC19A2O60779 497 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 PRKCHP24723 683 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 CACNG1Q06432 222 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 HNRNPDQ14103 355 aaKnown RBP10.1□□□□□ -0.79
PTCH1-204ENST00000375290 CTXN3Q4LDR2 81 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF599Q96NL3 588 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 COQ10BQ9H8M1 238 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 FAIMQ9NVQ4 179 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 MTMR10Q9NXD2 777 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 SEC14L3Q9UDX4 400 aa10.1□□□□□ -0.79
PTCH1-204ENST00000375290 PHF24Q9UPV7 400 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms