RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 C3orf30Q96M34 536 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 SLC2A11Q9BYW1 496 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 BRD9Q9H8M2 597 aa19.38■□□□□ 0.69
HDAC1-201ENST00000373548 SEMA4BQ9NPR2 832 aaPredicted RBP19.38■□□□□ 0.69
HDAC1-201ENST00000373548 A0A1B0GTL3 188 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 WASH3PC4AMC7 463 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 AIM2O14862 343 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 AZIN1O14977 448 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 POLR2EP19388 210 aaKnown RBP19.37■□□□□ 0.69
HDAC1-201ENST00000373548 ACTR3P61158 418 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 RCN1Q15293 331 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 LRRC73Q5JTD7 316 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 TXNDC11Q6PKC3 985 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 GDPD4Q6W3E5 623 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 RFLNAQ6ZTI6 216 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 LARP4Q71RC2 724 aaKnown RBP eCLIP19.37■□□□□ 0.697e-8■□□□□ 8
HDAC1-201ENST00000373548 ZNF483Q8TF39 744 aaPredicted RBP19.37■□□□□ 0.69
HDAC1-201ENST00000373548 CYB5D2Q8WUJ1 264 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 MRGPRX3Q96LB0 322 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 KLHL32Q96NJ5 620 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 KCNA7Q96RP8 456 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 CDH22Q9UJ99 828 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 CHD9Q3L8U1 2897 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 ATG2AQ2TAZ0 1938 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 ATP6AP2A0A1C7CYW4 349 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 SLC9A3R1O14745 358 aaPredicted RBP19.37■□□□□ 0.69
HDAC1-201ENST00000373548 UBDO15205 165 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 CCNT2O60583 730 aaKnown RBP19.37■□□□□ 0.69
HDAC1-201ENST00000373548 ATP6AP2O75787 350 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 NUDT2P50583 147 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 TBL3Q12788 808 aaKnown RBP19.37■□□□□ 0.69
HDAC1-201ENST00000373548 C6orf163Q5TEZ5 329 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 C1orf146Q5VVC0 180 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 ICE2Q659A1 982 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 PLPP6Q8IY26 295 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 HMGCLL1Q8TB92 370 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 FRS2Q8WU20 508 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 RCN3Q96D15 328 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 PLEKHG4BQ96PX9 1271 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 HTATIP2Q9BUP3 242 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 CD274Q9NZQ7 290 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 B4GALT6Q9UBX8 382 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 TSR3Q9UJK0 312 aaKnown RBP19.37■□□□□ 0.69
HDAC1-201ENST00000373548 PCTPQ9UKL6 214 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 TMCO1Q9UM00 188 aa19.37■□□□□ 0.69
HDAC1-201ENST00000373548 PDE5AO76074 875 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 SLC25A14O95258 325 aaPredicted RBP19.36■□□□□ 0.69
HDAC1-201ENST00000373548 C1SP09871 688 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 GPM6BQ13491 265 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 DHCR24Q15392 516 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 TGFBIQ15582 683 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 PDE12Q6L8Q7 609 aaKnown RBP19.36■□□□□ 0.69
HDAC1-201ENST00000373548 MACC1Q6ZN28 852 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 CELF5Q8N6W0 485 aaKnown RBP19.36■□□□□ 0.69
HDAC1-201ENST00000373548 C12orf76Q8N812 135 aaPredicted RBP19.36■□□□□ 0.69
HDAC1-201ENST00000373548 KCNV2Q8TDN2 545 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 TWIST2Q8WVJ9 160 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 SMG7Q92540 1137 aaKnown RBP19.36■□□□□ 0.69
HDAC1-201ENST00000373548 STMN2Q93045 179 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 RSPRY1Q96DX4 576 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 LBHD1Q9BQE6 289 aaPredicted RBP19.36■□□□□ 0.69
HDAC1-201ENST00000373548 PIDD1Q9HB75 910 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 DPP7Q9UHL4 492 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 FBXO10Q9UK96 956 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 ASB1Q9Y576 335 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 PTGDR2Q9Y5Y4 395 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 TTC34A8MYJ7 566 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 SNX2O60749 519 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 SORBS2O94875 1100 aaKnown RBP19.36■□□□□ 0.69
HDAC1-201ENST00000373548 TRIM16O95361 564 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 CYP17A1P05093 508 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 WEE1P30291 646 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 RECQLP46063 649 aaPredicted RBP19.36■□□□□ 0.69
HDAC1-201ENST00000373548 SQLEQ14534 574 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 SWT1Q5T5J6 900 aaKnown RBP19.36■□□□□ 0.69
HDAC1-201ENST00000373548 SBSNQ6UWP8 590 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 ESAMQ96AP7 390 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 PBXIP1Q96AQ6 731 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 UTP6Q9NYH9 597 aaKnown RBP19.36■□□□□ 0.69
HDAC1-201ENST00000373548 NUDT4Q9NZJ9 180 aa19.36■□□□□ 0.69
HDAC1-201ENST00000373548 A0A1W2PQ67 120 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 PIP5K1BO14986 540 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 GPC4O75487 556 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 NAA20P61599 178 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 TCEAL5Q5H9L2 206 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 DSELQ8IZU8 1212 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 EFCAB3Q8N7B9 438 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 KYQ8NBH2 561 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 CFAP61Q8NHU2 1237 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 HEPHQ9BQS7 1158 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 MCOLN1Q9GZU1 580 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 TUBB1Q9H4B7 451 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 EIF2B4Q9UI10 523 aaKnown RBP19.35■□□□□ 0.69
HDAC1-201ENST00000373548 C15orf41Q9Y2V0 281 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 WASF2Q9Y6W5 498 aa19.35■□□□□ 0.69
HDAC1-201ENST00000373548 ATP13A5Q4VNC0 1218 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 C9orf50Q5SZB4 431 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 GPRC6AQ5T6X5 926 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 TRIM68Q6AZZ1 485 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 GK5Q6ZS86 529 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms