RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 MRM3Q9HC36 420 aaKnown RBP9.12□□□□□ -0.95
RBBP4-201ENST00000373485 EPB41L5Q9HCM4 733 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 TRIM39Q9HCM9 518 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 TREX1Q9NSU2 369 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 DNAAF2Q9NVR5 837 aaKnown RBP9.12□□□□□ -0.95
RBBP4-201ENST00000373485 UCKL1Q9NWZ5 548 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 ATXN10Q9UBB4 475 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 APOBEC3BQ9UH17 382 aaKnown RBP9.12□□□□□ -0.95
RBBP4-201ENST00000373485 ZNHIT2Q9UHR6 403 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 DMGDHQ9UI17 866 aaKnown RBP9.12□□□□□ -0.95
RBBP4-201ENST00000373485 RIMKLBQ9ULI2 386 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 SUFUQ9UMX1 484 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 CHMP2BQ9UQN3 213 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 SLC17A4Q9Y2C5 497 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 PRKAB1Q9Y478 270 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 RPS6KL1Q9Y6S9 549 aa9.12□□□□□ -0.95
RBBP4-201ENST00000373485 MAGEB16A2A368 324 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 GOLGA8KD6RF30 607 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 GOLGA8TH3BQL2 631 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 TNFRSF10CO14798 259 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 CAPN5O15484 640 aaPredicted RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 PIAS2O75928 621 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 CDK14O94921 469 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 CELA2BP08218 269 aaPredicted RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 ZNF8P17098 575 aaPredicted RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 DGKAP23743 735 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 PSMA3P25788 255 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 EPHA8P29322 1005 aaPredicted RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 AKT1P31749 480 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 FOXN2P32314 431 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 ELK3P41970 407 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 RXRGP48443 463 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 HNRNPKP61978 463 aaKnown RBP eCLIP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 ACVR1Q04771 509 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 TMEM115Q12893 351 aaPredicted RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 PDIA2Q13087 525 aaKnown RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 SUZ12Q15022 739 aaKnown RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 ANKRD20A4Q4UJ75 823 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 GLE1Q53GS7 698 aaKnown RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 FASTKD1Q53R41 847 aaKnown RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 PRRT3Q5FWE3 981 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 LDLRAP1Q5SW96 308 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 PSAPL1Q6NUJ1 521 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 AFTPHQ6ULP2 937 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 ZDHHC24Q6UX98 284 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 DET1Q7L5Y6 550 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 ADGRG6Q86SQ4 1221 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 SERPINA9Q86WD7 417 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 IGDCC3Q8IVU1 814 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 PIANPQ8IYJ0 282 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 NXPE1Q8N323 547 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 OTUD6BQ8N6M0 293 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 ZNF548Q8NEK5 533 aaPredicted RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 FBXO25Q8TCJ0 367 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 PEX13Q92968 403 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 ART4Q93070 314 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 CCDC97Q96F63 343 aaPredicted RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 CFAP36Q96G28 342 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 TTC25Q96NG3 672 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 C19orf43Q9BQ61 176 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 LRRC61Q9BV99 259 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 TMEM168Q9H0V1 697 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 IL1RAPL1Q9NZN1 696 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 PLEKHM1Q9Y4G2 1056 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 PCYT1BQ9Y5K3 369 aaPredicted RBP9.11□□□□□ -0.95
RBBP4-201ENST00000373485 FAM186AA6NE01 2351 aa9.11□□□□□ -0.95
RBBP4-201ENST00000373485 TDRD6O60522 2096 aaKnown RBP9.1□□□□□ -0.95
RBBP4-201ENST00000373485 ZNF106Q9H2Y7 1883 aaKnown RBP9.1□□□□□ -0.95
RBBP4-201ENST00000373485 AGAP14A8MT82 685 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 YKT6O15498 198 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 FFAR2O15552 330 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 AQP9O43315 295 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 VEGFDO43915 354 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 NUAK1O60285 661 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 DNAJC6O75061 913 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 IVLP07476 585 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 CD59P13987 128 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 PGAM1P18669 254 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 PAMP19021 973 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 MSH3P20585 1137 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 ARNTP27540 789 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 DRG2P55039 364 aaKnown RBP9.1□□□□□ -0.95
RBBP4-201ENST00000373485 CAV1Q03135 178 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 GTF2H3Q13889 308 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 SEMA3AQ14563 771 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 FASTKD3Q14CZ7 662 aaKnown RBP9.1□□□□□ -0.95
RBBP4-201ENST00000373485 DBN1Q16643 649 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 GPR33Q49SQ1 333 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 PYCR3Q53H96 274 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 TEX35Q5T0J7 233 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 CRTC3Q6UUV7 619 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 CENPUQ71F23 418 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 CHST15Q7LFX5 561 aaPredicted RBP9.1□□□□□ -0.95
RBBP4-201ENST00000373485 LDB1Q86U70 411 aaPredicted RBP9.1□□□□□ -0.95
RBBP4-201ENST00000373485 TMEM135Q86UB9 458 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 CCDC25Q86WR0 208 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 GALNT13Q8IUC8 556 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 CCDC116Q8IYX3 515 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 ZBED8Q8IZ13 594 aa9.1□□□□□ -0.95
RBBP4-201ENST00000373485 UNC5BQ8IZJ1 945 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms