RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 PRDM12Q9H4Q4 367 aa11.11□□□□□ -0.63
RPRD1B-201ENST00000373433 CCM2LQ9NUG4 571 aaPredicted RBP11.11□□□□□ -0.63
RPRD1B-201ENST00000373433 MPP6Q9NZW5 540 aa11.11□□□□□ -0.63
RPRD1B-201ENST00000373433 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
RPRD1B-201ENST00000373433 B3GNT3Q9Y2A9 372 aa11.11□□□□□ -0.63
RPRD1B-201ENST00000373433 TRAF6Q9Y4K3 522 aa11.11□□□□□ -0.63
RPRD1B-201ENST00000373433 CCDC162PA2VCL2 907 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 MFSD11O43934 449 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SOD2P04179 222 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CYP11A1P05108 521 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 TSPAN8P19075 237 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 WDR5P61964 334 aaKnown RBP11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 PITX1P78337 314 aaPredicted RBP11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 NKX3-2P78367 333 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CBLBQ13191 982 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CCNYL2Q5T2Q4 361 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 BROXQ5VW32 411 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 DENND1CQ8IV53 801 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 ZCCHC7Q8N3Z6 543 aaKnown RBP11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SFRP1Q8N474 314 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 ZNF461Q8TAF7 563 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SH3YL1Q96HL8 342 aaPredicted RBP11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 LRCH3Q96II8 777 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 HGH1Q9BTY7 390 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 ASAH2Q9NR71 780 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 DPP7Q9UHL4 492 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 ERVK-11Q9UQG0 969 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 MAN1A2O60476 641 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 MTHFD1P11586 935 aaKnown RBP11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 NEK2P51955 445 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SMAD3P84022 425 aaKnown RBP11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 DSC1Q08554 894 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 KRT33BQ14525 404 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SPCS2Q15005 226 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 IMPG1Q17R60 797 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CCDC157Q569K6 752 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CNSTQ6PJW8 725 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 PARP8Q8N3A8 854 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 BLOC1S5Q8TDH9 187 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 NXNL1Q96CM4 212 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 FBRSL1Q9HCM7 1045 aaKnown RBP11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SNX10Q9Y5X0 201 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 NCAM2O15394 837 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 RAMP2O60895 175 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 XYLBO75191 536 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 ALDH4A1P30038 563 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SERPINB1P30740 379 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SCNN1AP37088 669 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 NNMTP40261 264 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 HLCSP50747 726 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 HK2P52789 917 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 MPP1Q00013 466 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 PIGFQ07326 219 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 NCBP2-AS2Q69YL0 99 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SLCO6A1Q86UG4 719 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CARNMT1Q8N4J0 409 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 AFAP1L2Q8N4X5 818 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 HMGCLL1Q8TB92 370 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SGCDQ92629 289 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 HTRA1Q92743 480 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 MUS81Q96NY9 551 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 KCTD15Q96SI1 283 aaPredicted RBP11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 TDRD1Q9BXT4 1180 aaKnown RBP11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 PIF1Q9H611 641 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CD320Q9NPF0 282 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CHRAC1Q9NRG0 131 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 TMPRSS4Q9NRS4 437 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 ARMC1Q9NVT9 282 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CD300AQ9UGN4 299 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 TBX21Q9UL17 535 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SLC38A8A6NNN8 435 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 RSL1D1O76021 490 aaKnown RBP11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 SBK3P0C264 359 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 MAGEA12P43365 314 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CLCQ05315 142 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 PAGE2BQ5JRK9 111 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 BRMS1LQ5PSV4 323 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 ANGPTL8Q6UXH0 198 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CLIP4Q8N3C7 705 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 TTC9BQ8N6N2 239 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 PDPRQ8NCN5 879 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CSF3RQ99062 836 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 AGPAT4Q9NRZ5 378 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 TMEM181Q9P2C4 612 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 ACOT9Q9Y305 439 aa11.1□□□□□ -0.63
RPRD1B-201ENST00000373433 CBX4O00257 560 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 AURKAO14965 403 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 C8AP07357 584 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 ZNF773Q6PK81 442 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 ZNF567Q8N184 647 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 C2orf15Q8WU43 125 aaKnown RBP11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 RAD9AQ99638 391 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 CGREF1Q99674 301 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 CEP44Q9C0F1 390 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 RBM22Q9NW64 420 aaKnown RBP eCLIP11.09□□□□□ -0.634e-7■■■■■ 29.9
RPRD1B-201ENST00000373433 NME4O00746 187 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 LRIG2O94898 1065 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 ALOX5P09917 674 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 NCK1P16333 377 aa11.09□□□□□ -0.63
RPRD1B-201ENST00000373433 IL7RP16871 459 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms