RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 LAPTM5Q13571 262 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 RABL3Q5HYI8 236 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 MTSS1LQ765P7 747 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ADAMTSL2Q86TH1 951 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 CMTM8Q8IZV2 173 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 C8orf59Q8N0T1 100 aaPredicted RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 NIPA2Q8N8Q9 360 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 TNIP2Q8NFZ5 429 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 OR10G6Q8NH81 332 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 SLC45A3Q96JT2 553 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 NSUN5Q96P11 429 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 RTKNQ9BST9 563 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 UGT2B28Q9BY64 529 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ABCB8Q9NUT2 735 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 GPSM3Q9Y4H4 160 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 GLYATL1P3A0A0U1RQE8 302 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 RNASEH1O60930 286 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 MLYCDO95822 493 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ATP5BP06576 529 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ELFN1P0C7U0 828 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 NOS3P29474 1203 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 AGTR2P50052 363 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ACLYP53396 1101 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 REP15Q6BDI9 236 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ANKRD23Q86SG2 305 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ZC3HC1Q86WB0 502 aaKnown RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 CFAP206Q8IYR0 622 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ARFGAP1Q8N6T3 406 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 UBR7Q8N806 425 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ART5Q96L15 291 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 KLHL1Q9NR64 748 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 POLR3BQ9NW08 1133 aaPredicted RBP9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ATP6V1HQ9UI12 483 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ZNF180Q9UJW8 692 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 CNTN6Q9UQ52 1028 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 DERAQ9Y315 318 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 GMPPBQ9Y5P6 360 aa9.03□□□□□ -0.96
SMARCA1-202ENST00000371122 ADCY6O43306 1168 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 TYROBPO43914 113 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 MFN2O95140 757 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 OTCP00480 354 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 FCGR1AP12314 374 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 PRKAA2P54646 552 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 C21orf59P57076 290 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 TAPT1Q6NXT6 567 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 KIAA1324Q6UXG2 1013 aaKnown RBP9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 LYSMD3Q7Z3D4 306 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 TBC1D19Q8N5T2 526 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 NPWQ8N729 165 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 UXS1Q8NBZ7 420 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 CCDC3Q9BQI4 270 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 GNPTGQ9UJJ9 305 aa9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 TNPO3Q9Y5L0 923 aaKnown RBP9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 COPG1Q9Y678 874 aaKnown RBP9.02□□□□□ -0.96
SMARCA1-202ENST00000371122 A8MT66 165 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 ISM1B1AKI9 464 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 INSIG1O15503 277 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 CLDN11O75508 207 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 STK16O75716 305 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 INHAP05111 366 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 SYN1P17600 705 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 WARSP23381 471 aaKnown RBP9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 HOXA11P31270 313 aaPredicted RBP9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 POLR2JP52435 117 aaKnown RBP9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 POLR2LP62875 67 aaKnown RBP9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 RIPK1Q13546 671 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 FAM187BQ17R55 369 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 SIRPB2Q5JXA9 342 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 CYB5D2Q8WUJ1 264 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 XAGE5Q8WWM1 108 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 CDKN2AIPNLQ96HQ2 116 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 CAPNS2Q96L46 248 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 VPS35Q96QK1 796 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 TCF12Q99081 682 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 NPY6RQ99463 290 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 FEM1AQ9BSK4 669 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 MCMBPQ9BTE3 642 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 TRIM45Q9H8W5 580 aaPredicted RBP9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 SELENONQ9NZV5 590 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 MAP4K5Q9Y4K4 846 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 PER2O15055 1255 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 OR1I1O60431 355 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 DLDP09622 509 aaKnown RBP9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 TNNI3P19429 210 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 SEPHS1P49903 392 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 DIO3P55073 304 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 TLE2Q04725 743 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 B3GNT6Q6ZMB0 384 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 DEF8Q6ZN54 512 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 AGMOQ6ZNB7 445 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 RBFAQ8N0V3 343 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 STK40Q8N2I9 435 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 HJURPQ8NCD3 748 aaPredicted RBP9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 PSMA8Q8TAA3 256 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 KLHL32Q96NJ5 620 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 AKTIPQ9H8T0 292 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 TMLHEQ9NVH6 421 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 HCSTQ9UBK5 93 aa9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 RBMX2Q9Y388 322 aaKnown RBP9.02□□□□□ -0.97
SMARCA1-202ENST00000371122 FAM159BA6NKW6 160 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms