RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 STYXQ8WUJ0 223 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 UROC1Q96N76 676 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 NUSAP1Q9BXS6 441 aaKnown RBP15.79■□□□□ 0.12
COL17A1-202ENST00000369733 ZBTB26Q9HCK0 441 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 PIK3C2AO00443 1686 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 SEMA3DO95025 777 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 TOP3BO95985 862 aaKnown RBP15.79■□□□□ 0.12
COL17A1-202ENST00000369733 RCVRNP35243 200 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 TUFMP49411 452 aaKnown RBP15.79■□□□□ 0.12
COL17A1-202ENST00000369733 CYP4F8P98187 520 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 PLD1Q13393 1074 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 MADCAM1Q13477 382 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 GPAT3Q53EU6 434 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 SETMARQ53H47 684 aaPredicted RBP15.79■□□□□ 0.12
COL17A1-202ENST00000369733 LCN1P1Q5VSP4 162 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 NIPAL1Q6NVV3 410 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 FAM180AQ6UWF9 173 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 XKR5Q6UX68 686 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.79■□□□□ 0.12
COL17A1-202ENST00000369733 LIX1Q8N485 282 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 OR52J3Q8NH60 311 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 GRPEL2Q8TAA5 225 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 LRRC58Q96CX6 371 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 LRRC3Q9BY71 257 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 TMEM138Q9NPI0 162 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 TBCCD1Q9NVR7 557 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 SNX10Q9Y5X0 201 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 CNTNAP1P78357 1384 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 E9PAM4 449 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 SERPINB7O75635 380 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 PRKCHP24723 683 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 RPL9P32969 192 aaKnown RBP15.79■□□□□ 0.12
COL17A1-202ENST00000369733 PSMD4P55036 377 aaKnown RBP15.79■□□□□ 0.12
COL17A1-202ENST00000369733 BEX3Q00994 111 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 ABRQ12979 859 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 GTF2H2Q13888 395 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 GTF2H2CQ6P1K8 395 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 TIFABQ6ZNK6 161 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 UBE2R2Q712K3 238 aaPredicted RBP15.79■□□□□ 0.12
COL17A1-202ENST00000369733 CLEC4DQ8WXI8 215 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 PPCDCQ96CD2 204 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 TMCO6Q96DC7 493 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 NSMCE3Q96MG7 304 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 TSPAN18Q96SJ8 248 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 AAASQ9NRG9 546 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 PCDHB9Q9Y5E1 797 aa15.79■□□□□ 0.12
COL17A1-202ENST00000369733 SMIM28A0A1B0GU29 152 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 PRMT5O14744 637 aaPredicted RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 GOT2P00505 430 aaKnown RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 RPN2P04844 631 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 HNF4AP41235 474 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 ENTPD1P49961 510 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 VGLL4Q14135 290 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 CLEC4CQ8WTT0 213 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 CNPPD1Q9BV87 410 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 ATP13A3Q9H7F0 1226 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 POLE3Q9NRF9 147 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 ZSCAN32Q9NX65 697 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 SIRPGQ9P1W8 387 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 KHDRBS3O75525 346 aaKnown RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 EEFSECP57772 596 aaKnown RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 PABPC1LQ4VXU2 614 aaKnown RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 COLEC12Q5KU26 742 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 TMEM126BQ8IUX1 230 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 ZNF607Q96SK3 696 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 COPS4Q9BT78 406 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 CNTN3Q9P232 1028 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 EIF2B4Q9UI10 523 aaKnown RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 STOML2Q9UJZ1 356 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 ADAMTS6Q9UKP5 1117 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 GMEB1Q9Y692 573 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 IRGMA1A4Y4 181 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 FAM234BA2RU67 622 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 PSIP1O75475 530 aaKnown RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 MAPK8P45983 427 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 OR2B6P58173 313 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 BRD9Q9H8M2 597 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 SPG21Q9NZD8 308 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 RWDD3Q9Y3V2 267 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 KIF1AQ12756 1690 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 PGRP06401 933 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 CD36P16671 472 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 IMPDH1P20839 514 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 FCGRTP55899 365 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 HUNKP57058 714 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 MBTD1Q05BQ5 628 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 SKIV2LQ15477 1246 aaKnown RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 KIAA0930Q6ICG6 404 aaPredicted RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 TAPT1Q6NXT6 567 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 ERMP1Q7Z2K6 904 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 OR8H1Q8NGG4 311 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 FCGR1BQ92637 280 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 HMGXB4Q9UGU5 601 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 PTBP2Q9UKA9 531 aaKnown RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 PCDHB1Q9Y5F3 818 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 FAM189A1O60320 539 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 SLC25A14O95258 325 aaPredicted RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 BMP10O95393 424 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 HSPA7P48741 367 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 SLC9A5Q14940 896 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms