RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 DNAJC17Q9NVM6 304 aaKnown RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 NPAP1Q9NZP6 1156 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 UBA2Q9UBT2 640 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 TAGLN3Q9UI15 199 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 RIMS3Q9UJD0 308 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 PSMD13Q9UNM6 376 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 EIF3LQ9Y262 564 aaKnown RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 MRPS23Q9Y3D9 190 aaKnown RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 SIT1Q9Y3P8 196 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 DTNAQ9Y4J8 743 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 HS3ST4Q9Y661 456 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 PIAS3Q9Y6X2 628 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 IGHV1OR15-9A0A0B4J2B8 117 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 E5RJQ4 531 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 DCLK1O15075 740 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 H6PDO95479 791 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 IFNB1P01574 187 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ITIH2P19823 946 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 IVDP26440 423 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 MATKP42679 507 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 HCAR3P49019 387 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF135P52742 658 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 POU6F1Q14863 301 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF852Q6ZMS4 543 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 KCTD20Q7Z5Y7 419 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 SPATA2LQ8IUW3 424 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 PRELID2Q8N945 189 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 TMEM35BQ8NCS4 154 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 FAM3CQ92520 227 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 C12orf43Q96C57 262 aaKnown RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ULBP1Q9BZM6 244 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 CPNE5Q9HCH3 593 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 XAB2Q9HCS7 855 aaKnown RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 SLCO1B3Q9NPD5 702 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 GKN1Q9NS71 199 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 NDFIP2Q9NV92 336 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 POLR3BQ9NW08 1133 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ABI2Q9NYB9 513 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 KCNK4Q9NYG8 393 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 VPS28Q9UK41 221 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ACAD8Q9UKU7 415 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 FZD10Q9ULW2 581 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 PCDHGA3Q9Y5H0 932 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 TRAV19A0A0A6YYK7 116 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 FAM72CH0Y354 149 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 SGK1O00141 431 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 SLC9A3R1O14745 358 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 TM9SF1O15321 606 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 FZD6O60353 706 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 GZMAP12544 262 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 PRKCHP24723 683 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 IST1P53990 364 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 DYNLT1P63172 113 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ECT2LQ008S8 904 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 TSPY1Q01534 308 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 SLC6A3Q01959 620 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 CALCOCO2Q13137 446 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 CEP78Q5JTW2 689 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 FAM72AQ5TYM5 149 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 BSPRYQ5W0U4 402 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 FAM72DQ6L9T8 149 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 OGFOD2Q6N063 350 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 SCYL2Q6P3W7 929 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 FAM72BQ86X60 149 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 METTL23Q86XA0 190 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 CLYBLQ8N0X4 340 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 RFWD2Q8NHY2 731 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ZNF347Q96SE7 839 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 SLC29A1Q99808 456 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 PAIP1Q9H074 479 aaKnown RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ATP13A1Q9HD20 1204 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 MRPL47Q9HD33 250 aaKnown RBP6.83□□□□□ -1.32
CSDE1-204ENST00000369530 ATP13A2Q9NQ11 1180 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 TMEM248Q9NWD8 314 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 HEY2Q9UBP5 337 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 APPL1Q9UKG1 709 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 AP4B1Q9Y6B7 739 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 SCINQ9Y6U3 715 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 CPAMD8Q8IZJ3 1885 aa6.83□□□□□ -1.32
CSDE1-204ENST00000369530 RELNP78509 3460 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 SNTNA6NMZ2 147 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 CFAP99D6REC4 459 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 H0YC42 278 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 PTPN7P35236 360 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 ALDH1A3P47895 512 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TPD52P55327 224 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 YWHAEP62258 255 aaKnown RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 ARF5P84085 180 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 SF3A3Q12874 501 aaKnown RBP eCLIP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 PRKD1Q15139 912 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 CDO1Q16878 200 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 HECTD3Q5T447 861 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 SHEQ5VZ18 495 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 LPCAT4Q643R3 524 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 STRADAQ7RTN6 431 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 C17orf82Q86X59 251 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-204ENST00000369530 ANKRD42Q8N9B4 389 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 TTC13Q8NBP0 860 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 OR6B3Q8NGW1 331 aa6.82□□□□□ -1.32
CSDE1-204ENST00000369530 HSPH1Q92598 858 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms