RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 NEMP2A6NFY4 417 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 NDST3O95803 873 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 ITGB6P18564 788 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 TFEBP19484 476 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 RPL14P50914 215 aaKnown RBP10.58□□□□□ -0.72
TPM3-212ENST00000368533 ART3Q13508 389 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 TGFBIQ15582 683 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 TMEM215Q68D42 235 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 LYSMD3Q7Z3D4 306 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 FSTL5Q8N475 847 aaPredicted RBP10.58□□□□□ -0.72
TPM3-212ENST00000368533 NXNL1Q96CM4 212 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 GPAMQ9HCL2 828 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 SARS2Q9NP81 518 aaKnown RBP10.58□□□□□ -0.72
TPM3-212ENST00000368533 TRNAU1APQ9NX07 287 aaKnown RBP10.58□□□□□ -0.72
TPM3-212ENST00000368533 XPR1Q9UBH6 696 aa10.58□□□□□ -0.72
TPM3-212ENST00000368533 KANSL1LA0AUZ9 987 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 ZNF195O14628 629 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 HDAC3O15379 428 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 OR1I1O60431 355 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 DNAJA2O60884 412 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 UGT2B4P06133 528 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 PAMP19021 973 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 CDH2P19022 906 aaPredicted RBP10.57□□□□□ -0.72
TPM3-212ENST00000368533 CR2P20023 1033 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 PIK3R1P27986 724 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 TMED10P49755 219 aaKnown RBP10.57□□□□□ -0.72
TPM3-212ENST00000368533 CSE1LP55060 971 aaKnown RBP10.57□□□□□ -0.72
TPM3-212ENST00000368533 LSM12Q3MHD2 195 aaKnown RBP10.57□□□□□ -0.72
TPM3-212ENST00000368533 ZRANB3Q5FWF4 1079 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 Q6ZNX1 250 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 RFLNAQ6ZTI6 216 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 TSPAN33Q86UF1 283 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 ZSWIM9Q86XI8 627 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 FBXW8Q8N3Y1 598 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 ACTRT2Q8TDY3 377 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 IRF7Q92985 503 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 OXSMQ9NWU1 459 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 TMA7Q9Y2S6 64 aaKnown RBP10.57□□□□□ -0.72
TPM3-212ENST00000368533 DTNAQ9Y4J8 743 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 MUC3AQ02505 3323 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 GON4LQ3T8J9 2241 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 IQCF5A8MTL0 148 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 TMEM233B4DJY2 109 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 ANKRD66B4E2M5 251 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 THRAP10827 490 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 STMN1P16949 149 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 NAT1P18440 290 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 SLC12A1Q13621 1099 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 ARMC12Q5T9G4 340 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 LIPMQ5VYY2 423 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 RETSATQ6NUM9 610 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 ELMSAN1Q6PJG2 1045 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 FAM151BQ6UXP7 276 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 TAS2R42Q7RTR8 314 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 FEM1CQ96JP0 617 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 TRIB3Q96RU7 358 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 GPR63Q9BZJ6 419 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 RHOJQ9H4E5 214 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 SPHK2Q9NRA0 654 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 NDUFA13Q9P0J0 144 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 KIAA1522Q9P206 1035 aaPredicted RBP10.57□□□□□ -0.72
TPM3-212ENST00000368533 CD84Q9UIB8 345 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 ZDHHC2Q9UIJ5 367 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 STOML2Q9UJZ1 356 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 DMTF1Q9Y222 760 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 CDYLQ9Y232 598 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 RAP2CQ9Y3L5 183 aa10.57□□□□□ -0.72
TPM3-212ENST00000368533 TMEM114B3SHH9 223 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 WASH3PC4AMC7 463 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 SRCP12931 536 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 HLA-EP13747 358 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 HNRNPLP14866 589 aaKnown RBP eCLIP10.56□□□□□ -0.72
TPM3-212ENST00000368533 FMO4P31512 558 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 RCVRNP35243 200 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 SLC6A11P48066 632 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 PRSS36Q5K4E3 855 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 PSAPL1Q6NUJ1 521 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 PIANPQ8IYJ0 282 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 ADGRG2Q8IZP9 1017 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 DCAF4L2Q8NA75 395 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 KYQ8NBH2 561 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 FGF13Q92913 245 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 RCN3Q96D15 328 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 EID2BQ96D98 161 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 DCUN1D1Q96GG9 259 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 PAIP1Q9H074 479 aaKnown RBP10.56□□□□□ -0.72
TPM3-212ENST00000368533 DUS2Q9NX74 493 aaKnown RBP10.56□□□□□ -0.72
TPM3-212ENST00000368533 ZDHHC7Q9NXF8 308 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 FAM8A1Q9UBU6 413 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 CEPT1Q9Y6K0 416 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 C1orf232A0A0U1RR37 186 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 TTC34A8MYJ7 566 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 CCNT2O60583 730 aaKnown RBP10.56□□□□□ -0.72
TPM3-212ENST00000368533 CLDN7O95471 211 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 FGF1P05230 155 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 APOA4P06727 396 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 TSPAN8P19075 237 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 HLA-DPA1P20036 260 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 CA5AP35218 305 aa10.56□□□□□ -0.72
TPM3-212ENST00000368533 CDKN2DP55273 166 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms