RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 ITIH5Q86UX2 942 aa8.8□□□□□ -1
THBS3-201ENST00000368378 FAM126BQ8IXS8 530 aa8.8□□□□□ -1
THBS3-201ENST00000368378 LGI2Q8N0V4 545 aa8.8□□□□□ -1
THBS3-201ENST00000368378 PGBD5Q8N414 524 aa8.8□□□□□ -1
THBS3-201ENST00000368378 METTL6Q8TCB7 284 aa8.8□□□□□ -1
THBS3-201ENST00000368378 DDI1Q8WTU0 396 aa8.8□□□□□ -1
THBS3-201ENST00000368378 FBXO32Q969P5 355 aa8.8□□□□□ -1
THBS3-201ENST00000368378 CCDC28BQ9BUN5 200 aa8.8□□□□□ -1
THBS3-201ENST00000368378 CHID1Q9BWS9 393 aa8.8□□□□□ -1
THBS3-201ENST00000368378 AMBNQ9NP70 447 aa8.8□□□□□ -1
THBS3-201ENST00000368378 GKN1Q9NS71 199 aa8.8□□□□□ -1
THBS3-201ENST00000368378 POLR3HQ9Y535 204 aaPredicted RBP8.8□□□□□ -1
THBS3-201ENST00000368378 TSC2P49815 1807 aa8.8□□□□□ -1
THBS3-201ENST00000368378 A0A087X1B8 175 aa8.8□□□□□ -1
THBS3-201ENST00000368378 A8MU76 341 aa8.8□□□□□ -1
THBS3-201ENST00000368378 HS6ST1O60243 411 aa8.8□□□□□ -1
THBS3-201ENST00000368378 S1PR4O95977 384 aa8.8□□□□□ -1
THBS3-201ENST00000368378 RGRP47804 291 aa8.8□□□□□ -1
THBS3-201ENST00000368378 RENBPP51606 427 aa8.8□□□□□ -1
THBS3-201ENST00000368378 FKBP1BP68106 108 aa8.8□□□□□ -1
THBS3-201ENST00000368378 FAM189BP81408 668 aa8.8□□□□□ -1
THBS3-201ENST00000368378 SIM2Q14190 667 aaPredicted RBP8.8□□□□□ -1
THBS3-201ENST00000368378 GRB14Q14449 540 aa8.8□□□□□ -1
THBS3-201ENST00000368378 RAB39AQ14964 217 aa8.8□□□□□ -1
THBS3-201ENST00000368378 XKR4Q5GH76 650 aa8.8□□□□□ -1
THBS3-201ENST00000368378 NHSL2Q5HYW2 709 aa8.8□□□□□ -1
THBS3-201ENST00000368378 GRAMD4Q6IC98 578 aa8.8□□□□□ -1
THBS3-201ENST00000368378 CCDC80Q76M96 950 aa8.8□□□□□ -1
THBS3-201ENST00000368378 GLT6D1Q7Z4J2 308 aa8.8□□□□□ -1
THBS3-201ENST00000368378 BTLAQ7Z6A9 289 aa8.8□□□□□ -1
THBS3-201ENST00000368378 OR10A6Q8NH74 314 aa8.8□□□□□ -1
THBS3-201ENST00000368378 EEF1AKMT1Q8WVE0 214 aa8.8□□□□□ -1
THBS3-201ENST00000368378 TRNAU1APQ9NX07 287 aaKnown RBP8.8□□□□□ -1
THBS3-201ENST00000368378 SCHIP1Q9P0W5 487 aaPredicted RBP8.8□□□□□ -1
THBS3-201ENST00000368378 CDH9Q9ULB4 789 aa8.8□□□□□ -1
THBS3-201ENST00000368378 LINC00854A0A1B0GVQ3 168 aa8.8□□□□□ -1
THBS3-201ENST00000368378 HOXA2O43364 376 aa8.8□□□□□ -1
THBS3-201ENST00000368378 XPNPEP2O43895 674 aa8.8□□□□□ -1
THBS3-201ENST00000368378 NBNO60934 754 aa8.8□□□□□ -1
THBS3-201ENST00000368378 ECI2O75521 394 aa8.8□□□□□ -1
THBS3-201ENST00000368378 C1RP00736 705 aa8.8□□□□□ -1
THBS3-201ENST00000368378 SLC2A4P14672 509 aa8.8□□□□□ -1
THBS3-201ENST00000368378 LBPP18428 481 aa8.8□□□□□ -1
THBS3-201ENST00000368378 IMPDH1P20839 514 aa8.8□□□□□ -1
THBS3-201ENST00000368378 LBX1P52954 281 aa8.8□□□□□ -1
THBS3-201ENST00000368378 RPL38P63173 70 aaKnown RBP8.8□□□□□ -1
THBS3-201ENST00000368378 TAF10Q12962 218 aa8.8□□□□□ -1
THBS3-201ENST00000368378 DDX39BQ13838 428 aaKnown RBP8.8□□□□□ -1
THBS3-201ENST00000368378 MEP1AQ16819 746 aa8.8□□□□□ -1
THBS3-201ENST00000368378 INTS6LQ5JSJ4 861 aaKnown RBP8.8□□□□□ -1
THBS3-201ENST00000368378 RAB41Q5JT25 222 aa8.8□□□□□ -1
THBS3-201ENST00000368378 PM20D1Q6GTS8 502 aa8.8□□□□□ -1
THBS3-201ENST00000368378 GLYATQ6IB77 296 aa8.8□□□□□ -1
THBS3-201ENST00000368378 ANGPTL8Q6UXH0 198 aa8.8□□□□□ -1
THBS3-201ENST00000368378 CAMK1DQ8IU85 385 aa8.8□□□□□ -1
THBS3-201ENST00000368378 CPSF7Q8N684 471 aaKnown RBP8.8□□□□□ -1
THBS3-201ENST00000368378 NACC2Q96BF6 587 aa8.8□□□□□ -1
THBS3-201ENST00000368378 RBM38Q9H0Z9 239 aaKnown RBP8.8□□□□□ -1
THBS3-201ENST00000368378 ZNF385DQ9H6B1 395 aa8.8□□□□□ -1
THBS3-201ENST00000368378 RPF2Q9H7B2 306 aaKnown RBP8.8□□□□□ -1
THBS3-201ENST00000368378 LATS2Q9NRM7 1088 aa8.8□□□□□ -1
THBS3-201ENST00000368378 FARSBQ9NSD9 589 aaKnown RBP8.8□□□□□ -1
THBS3-201ENST00000368378 CATSPERZQ9NTU4 200 aa8.8□□□□□ -1
THBS3-201ENST00000368378 COMMD8Q9NX08 183 aa8.8□□□□□ -1
THBS3-201ENST00000368378 FKBPLQ9UIM3 349 aa8.8□□□□□ -1
THBS3-201ENST00000368378 TRIM17Q9Y577 477 aa8.8□□□□□ -1
THBS3-201ENST00000368378 NUMA1Q14980 2115 aa8.8□□□□□ -1
THBS3-201ENST00000368378 MYO10Q9HD67 2058 aa8.79□□□□□ -1
THBS3-201ENST00000368378 GMNNO75496 209 aa8.79□□□□□ -1
THBS3-201ENST00000368378 TCF3P15923 654 aa8.79□□□□□ -1
THBS3-201ENST00000368378 AGXTP21549 392 aa8.79□□□□□ -1
THBS3-201ENST00000368378 HERVK_113P63132 956 aa8.79□□□□□ -1
THBS3-201ENST00000368378 PFKPQ01813 784 aa8.79□□□□□ -1
THBS3-201ENST00000368378 BTG3Q14201 252 aaPredicted RBP8.79□□□□□ -1
THBS3-201ENST00000368378 COL19A1Q14993 1142 aa8.79□□□□□ -1
THBS3-201ENST00000368378 PSAPL1Q6NUJ1 521 aa8.79□□□□□ -1
THBS3-201ENST00000368378 LARP4Q71RC2 724 aaKnown RBP eCLIP8.79□□□□□ -1
THBS3-201ENST00000368378 PIANPQ8IYJ0 282 aa8.79□□□□□ -1
THBS3-201ENST00000368378 THEM5Q8N1Q8 247 aa8.79□□□□□ -1
THBS3-201ENST00000368378 PELI3Q8N2H9 469 aa8.79□□□□□ -1
THBS3-201ENST00000368378 OR4L1Q8NH43 312 aa8.79□□□□□ -1
THBS3-201ENST00000368378 LINGO1Q96FE5 620 aa8.79□□□□□ -1
THBS3-201ENST00000368378 RANBP9Q96S59 729 aa8.79□□□□□ -1
THBS3-201ENST00000368378 ERVK-6Q9BXR3 956 aa8.79□□□□□ -1
THBS3-201ENST00000368378 NOL6Q9H6R4 1146 aaKnown RBP8.79□□□□□ -1
THBS3-201ENST00000368378 ZNF696Q9H7X3 374 aa8.79□□□□□ -1
THBS3-201ENST00000368378 RASSF1Q9NS23 344 aa8.79□□□□□ -1
THBS3-201ENST00000368378 TREX1Q9NSU2 369 aa8.79□□□□□ -1
THBS3-201ENST00000368378 SLC38A7Q9NVC3 462 aa8.79□□□□□ -1
THBS3-201ENST00000368378 RNF186Q9NXI6 227 aa8.79□□□□□ -1
THBS3-201ENST00000368378 SUCOQ9UBS9 1254 aaKnown RBP8.79□□□□□ -1
THBS3-201ENST00000368378 PAIP2BQ9ULR5 123 aaKnown RBP8.79□□□□□ -1
THBS3-201ENST00000368378 ANGPTL3Q9Y5C1 460 aa8.79□□□□□ -1
THBS3-201ENST00000368378 SPO11Q9Y5K1 396 aa8.79□□□□□ -1
THBS3-201ENST00000368378 MIA3Q5JRA6 1907 aa8.79□□□□□ -1
THBS3-201ENST00000368378 TRIM24O15164 1050 aa8.79□□□□□ -1
THBS3-201ENST00000368378 NPHS1O60500 1241 aa8.79□□□□□ -1
THBS3-201ENST00000368378 LDLRP01130 860 aa8.79□□□□□ -1
THBS3-201ENST00000368378 CHRNA1P02708 482 aa8.79□□□□□ -1
THBS3-201ENST00000368378 CAPN1P07384 714 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms