RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 TIGD2Q4W5G0 525 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 MMAAQ8IVH4 418 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM86AQ8N2M4 240 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ACSF2Q96CM8 615 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 XAGE2Q96GT9 111 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GMPPAQ96IJ6 420 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PTCHD1Q96NR3 888 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 A0A1B0GTQ1 180 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ASTE1Q2TB18 679 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 XKR3Q5GH77 459 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TBCELQ5QJ74 424 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PHF10Q8WUB8 498 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 DHX35Q9H5Z1 703 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CERS4Q9HA82 394 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SIX2Q9NPC8 291 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 RPLP0P05388 317 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 LYNP07948 512 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 FSTL1Q12841 308 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 OR2T4Q8NH00 348 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 OR2M2Q96R28 347 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PCYT2Q99447 389 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CXorf21Q9HAI6 301 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 AIFM1O95831 613 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 USP17L8P0C7I0 530 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ETS1P14921 441 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 BGNP21810 368 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 BLOC1S1P78537 153 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 HKDC1Q2TB90 917 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 HSDL1Q3SXM5 330 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ATP6AP1LQ52LC2 224 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 DENND5AQ6IQ26 1287 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 DPY19L2P1Q6NXN4 242 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CRTC3Q6UUV7 619 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TMC7Q7Z402 723 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 RIOX2Q8IUF8 465 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 OR8J1Q8NGP2 316 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 MOAP1Q96BY2 351 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF317Q96PQ6 595 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ATP13A3Q9H7F0 1226 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SAE1Q9UBE0 346 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 FKBP7Q9Y680 259 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 NDUFB5O43674 189 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 JUPP14923 745 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 EPHA7Q15375 998 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 DPY19L3Q6ZPD9 716 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 VRK2Q86Y07 508 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SMARCD2Q92925 531 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TNKS2Q9H2K2 1166 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 COL20A1Q9P218 1284 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TCF3P15923 654 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 RHDQ02161 417 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 LCP2Q13094 533 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ZBTB2Q8N680 514 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 INO80EQ8NBZ0 244 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GPX8Q8TED1 209 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 NOX3Q9HBY0 568 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 COMMD9Q9P000 198 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 STX16O14662 325 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CNTN5O94779 1100 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TTPAP49638 278 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF605Q86T29 641 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 RAB11FIP5Q9BXF6 653 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TLR8Q9NR97 1041 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 KIF25Q9UIL4 384 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 COG5Q9UP83 839 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TNFRSF11BO00300 401 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 FTH1P02794 183 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 STAG3L2P0CL84 134 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GJA1P17302 382 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 COILP38432 576 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 GEMP55040 296 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PLA2G7Q13093 441 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 BRSK1Q8TDC3 778 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 SDR42E1Q8WUS8 393 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 C7orf43Q8WVR3 580 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 RNFT2Q96EX2 444 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 DUS3LQ96G46 650 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 B3GNT2Q9NY97 397 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF175Q9Y473 711 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 KIAA1210Q9ULL0 1709 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 HECW2Q9P2P5 1572 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 TNS3Q68CZ2 1445 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 A0A1W2PPW3 197 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PHYHO14832 338 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 RP2O75695 350 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 RYKP34925 604 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 EPHB1P54762 984 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 CTSWP56202 376 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 KIAA1324Q6UXG2 1013 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 MCFD2Q8NI22 146 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 NSUN6Q8TEA1 469 aaKnown RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 PAFAH2Q99487 392 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 NMUR2Q9GZQ4 415 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 HDHD2Q9H0R4 259 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 DNAJC11Q9NVH1 559 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 NFIBO00712 420 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 AK1P00568 194 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 NUDT7P0C024 238 aa3.73□□□□□ -1.81
SYNE1-207ENST00000367255 NFE2Q16621 373 aaPredicted RBP3.73□□□□□ -1.81
SYNE1-207ENST00000367255 ATAD1Q8NBU5 361 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms