RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 METTL27Q8N6F8 245 aaPredicted RBP3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 EMC1Q8N766 993 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 SLC38A9Q8NBW4 561 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 RBM15BQ8NDT2 890 aaKnown RBP3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 PPHLN1Q8NEY8 458 aaKnown RBP3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 SPATA3Q8NHX4 192 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 TRPC4APQ8TEL6 797 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 TMEM255BQ8WV15 326 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 POMGNT1Q8WZA1 660 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 NR4A3Q92570 626 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 PHF21AQ96BD5 680 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 GAD1Q99259 594 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 GFI1Q99684 422 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 SEMA3CQ99985 751 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 FTOQ9C0B1 505 aaKnown RBP eCLIP3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 PLK3Q9H4B4 646 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 SH2D4AQ9H788 454 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 FKRPQ9H9S5 495 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 MDFICQ9P1T7 246 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 MARCH4Q9P2E8 410 aaPredicted RBP3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 TMEM184BQ9Y519 407 aaPredicted RBP3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 LYVE1Q9Y5Y7 322 aa3.06□□□□□ -1.92
RNU4-48P-201ENST00000365559 SMAD9O15198 467 aaKnown RBP3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 ZNF217O75362 1048 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 PTP4A3O75365 173 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 IGHV4-39P01824 125 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 TMEM11P17152 192 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 GM2AP17900 193 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 GABRB1P18505 474 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 TCEA1P23193 301 aaKnown RBP3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 TIMP3P35625 211 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 AHRP35869 848 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 HADHAP40939 763 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 GARSP41250 739 aaKnown RBP3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 MSH2P43246 934 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 RXRGP48443 463 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 CAMPP49913 170 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 MMP14P50281 582 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 CDH8P55286 799 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 PRAMEP78395 509 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 LRMPQ12912 555 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 IKQ13123 557 aaPredicted RBP3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 DMP1Q13316 513 aaPredicted RBP3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 PCGF3Q3KNV8 242 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 RAB6CQ53S08 254 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 PLXDC2Q6UX71 529 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 CHST9Q7L1S5 443 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 TRMT1LQ7Z2T5 733 aaKnown RBP3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 PIWIL4Q7Z3Z4 852 aaKnown RBP3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 CEP97Q8IW35 865 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 TTC39CQ8N584 583 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 SLC5A8Q8N695 610 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 GSDMBQ8TAX9 411 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 SCFD2Q8WU76 684 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 SKA1Q96BD8 255 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 OXNAD1Q96HP4 312 aaPredicted RBP3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 HES6Q96HZ4 224 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 SRSF8Q9BRL6 282 aaKnown RBP3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 TMEM39BQ9GZU3 492 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 RAB6CQ9H0N0 254 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 ZNF334Q9HCZ1 680 aaPredicted RBP3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 EIF2B3Q9NR50 452 aaKnown RBP3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 PAG1Q9NWQ8 432 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 FBXL17Q9UF56 701 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 POLG2Q9UHN1 485 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 SESN1Q9Y6P5 492 aa3.05□□□□□ -1.92
RNU4-48P-201ENST00000365559 SYNGR3O43761 229 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 CTSVO60911 334 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 GPC4O75487 556 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 TPPPO94811 219 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 HIST1H2ABP04908 130 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 SRPRAP08240 638 aaKnown RBP3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 CLTBP09497 229 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 SELLP14151 372 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 HIST1H2ADP20671 130 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 HOXA1P49639 335 aaPredicted RBP3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 TERF1P54274 439 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 CD81P60033 236 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 GAGE5Q13069 117 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 GAGE6Q13070 117 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 MVPQ14764 893 aaKnown RBP3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 CRYMQ14894 314 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 PLA2G4FQ68DD2 849 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 TMEM154Q6P9G4 183 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 PLEKHM3Q6ZWE6 761 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 HIST3H2AQ7L7L0 130 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 TICAM1Q8IUC6 712 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 EPHX4Q8IUS5 362 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 HACE1Q8IYU2 909 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 GBGT1Q8N5D6 347 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 GCSAMQ8N6F7 178 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 ST6GAL2Q96JF0 529 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 NCAPGQ9BPX3 1015 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 CHCHD6Q9BRQ6 235 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 ZHX3Q9H4I2 956 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 TRPC7Q9HCX4 862 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 OGFRQ9NZT2 677 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 TSPYL4Q9UJ04 414 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 CMAHPQ9Y471 501 aa3.04□□□□□ -1.92
RNU4-48P-201ENST00000365559 IGLV5-45A0A087WSX0 123 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms