RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 ITCHQ96J02 903 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 SH3GL1Q99961 368 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 HERC2P3Q9BVR0 1158 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 IPPKQ9H8X2 491 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 ARL15Q9NXU5 204 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 GMIPQ9P107 970 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 MYO9BQ13459 2157 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 PNMA8CA0A1B0GUJ8 204 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 NT5C1B-RDH14C9J2C7 533 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 ARVCFO00192 962 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 FBP2O00757 339 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 CNOT3O75175 753 aaKnown RBP13.54□□□□□ -0.24
SGMS1-202ENST00000361781 VPS4BO75351 444 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 MYO1DO94832 1006 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 COL6A1P12109 1028 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 IGFBP6P24592 240 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-202ENST00000361781 HOXA11P31270 313 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-202ENST00000361781 AFF1P51825 1210 aaKnown RBP13.54□□□□□ -0.24
SGMS1-202ENST00000361781 OR4D2P58180 307 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 DAG1Q14118 895 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 ZNF678Q5SXM1 525 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 PPP4R4Q6NUP7 873 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 PHACTR4Q8IZ21 702 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 TOR3AQ9H497 397 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 SLAMF8Q9P0V8 285 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 DERAQ9Y315 318 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 BCKDKO14874 412 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 STAU1O95793 577 aaKnown RBP13.54□□□□□ -0.24
SGMS1-202ENST00000361781 HLA-DPA1P20036 260 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 ACVRL1P37023 503 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 ZNF280AP59817 542 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-202ENST00000361781 DUSP28Q4G0W2 176 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 SIRPB2Q5JXA9 342 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 DEPDC1Q5TB30 811 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 NKAPQ8N5F7 415 aaKnown RBP13.54□□□□□ -0.24
SGMS1-202ENST00000361781 TMEM102Q8N9M5 508 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-202ENST00000361781 SMG8Q8ND04 991 aaKnown RBP13.54□□□□□ -0.24
SGMS1-202ENST00000361781 PSD4Q8NDX1 1056 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 OR52J3Q8NH60 311 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 NTAN1Q96AB6 310 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 TMEM209Q96SK2 561 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 CCM2LQ9NUG4 571 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-202ENST00000361781 FKBPLQ9UIM3 349 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 MAGEL2Q9UJ55 1249 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 PTCH2Q9Y6C5 1203 aa13.54□□□□□ -0.24
SGMS1-202ENST00000361781 ZNF195O14628 629 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 ECI2O75521 394 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 PGLSO95336 258 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 HAPLN1P10915 354 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-202ENST00000361781 SLC11A2P49281 568 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 BMXP51813 675 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 VBP1P61758 197 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 RUNX1T1Q06455 604 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 CDH18Q13634 790 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 UNC50Q53HI1 259 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 IQSEC1Q6DN90 963 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 UGT3A1Q6NUS8 523 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 RETREG3Q86VR2 466 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 GATAD2AQ86YP4 633 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 CILP2Q8IUL8 1156 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 TMEM40Q8WWA1 233 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 ASB8Q9H765 288 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 TRMT13Q9NUP7 481 aaKnown RBP13.53□□□□□ -0.24
SGMS1-202ENST00000361781 SNPHO15079 494 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 NDUFS2O75306 463 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 IMPDH2P12268 514 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 PKMP14618 531 aaKnown RBP13.53□□□□□ -0.24
SGMS1-202ENST00000361781 AZGP1P25311 298 aaKnown RBP13.53□□□□□ -0.24
SGMS1-202ENST00000361781 AXLP30530 894 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 TUBA4AP68366 448 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 TMEM236Q5W0B7 351 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 NANOGP8Q6NSW7 305 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 GPR180Q86V85 440 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 HIPK1Q86Z02 1210 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 APOL4Q9BPW4 351 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 NANOGQ9H9S0 305 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 ADARB2Q9NS39 739 aaKnown RBP13.53□□□□□ -0.24
SGMS1-202ENST00000361781 OLAHQ9NV23 265 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 VPS9D1Q9Y2B5 631 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 RREB1Q92766 1687 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 H3BMQ9 156 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 IRAK2O43187 625 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 RGS14O43566 566 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 RPP40O75818 363 aaKnown RBP13.53□□□□□ -0.24
SGMS1-202ENST00000361781 ITGBL1O95965 494 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-202ENST00000361781 GSRP00390 522 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 CCDC159P0C7I6 412 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 G6PDP11413 515 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 ZNF12P17014 697 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 MZF1P28698 734 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-202ENST00000361781 CYP2C18P33260 490 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 ATP6V1E1P36543 226 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 RPL26P61254 145 aaKnown RBP13.53□□□□□ -0.24
SGMS1-202ENST00000361781 GRM2Q14416 872 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 SPANXN2Q5MJ10 180 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 ARMC4Q5T2S8 1044 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 DENND1CQ8IV53 801 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 CHERPQ8IWX8 916 aaKnown RBP13.53□□□□□ -0.24
SGMS1-202ENST00000361781 UBE2J2Q8N2K1 259 aa13.53□□□□□ -0.24
SGMS1-202ENST00000361781 RTL3Q8N8U3 475 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms