RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ZNF232Q9UNY5 417 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 MYO5AQ9Y4I1 1855 aaKnown RBP15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 OR4F21O95013 312 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 SEMA3DO95025 777 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 PRKAR1AP10644 381 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 OVOS1Q6IE37 1185 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 AFTPHQ6ULP2 937 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 USP43Q70EL4 1123 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 TXNDC5Q8NBS9 432 aaKnown RBP15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 SPPL2BQ8TCT7 592 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 SORT1Q99523 831 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 IRF2BPLQ9H1B7 796 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 DPEP3Q9H4B8 488 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 NUP188Q5SRE5 1749 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 NWD2Q9ULI1 1742 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 RASAL1O95294 804 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 RHOCP08134 193 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 CRATP43155 626 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 HERVK_113P63132 956 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 HIST2H2ACQ16777 129 aaPredicted RBP15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 TSTD2Q5T7W7 516 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 HIST2H2AA3Q6FI13 130 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 RIOX2Q8IUF8 465 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 EPHX4Q8IUS5 362 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 ALDH16A1Q8IZ83 802 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 ZNF597Q96LX8 424 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 ERVK-6Q9BXR3 956 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 GIT1Q9Y2X7 761 aa15.85■□□□□ 0.13
CLSTN1-201ENST00000361311 FAM234BA2RU67 622 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 H0YAE9 185 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 SUV39H1O43463 412 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 PLOD3O60568 738 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 SERPIND1P05546 499 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 PCSK6P29122 969 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 GNPDA1P46926 289 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 FOXM1Q08050 763 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 MADCAM1Q13477 382 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 ZNF404Q494X3 552 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 BHMTQ93088 406 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 ESAMQ96AP7 390 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 GIMAP2Q9UG22 337 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 ZNF222Q9UK12 451 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 NOS1APO75052 506 aaPredicted RBP15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 C7P10643 843 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 CCNCP24863 283 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 CHRNA4P43681 627 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 NOVP48745 357 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 C9orf131Q5VYM1 1079 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 C16orf62Q7Z3J2 963 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 TMEM192Q8IY95 271 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 WDR36Q8NI36 951 aaKnown RBP15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 PHF10Q8WUB8 498 aaKnown RBP15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 FCGR1BQ92637 280 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 HDAC2Q92769 488 aaKnown RBP15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 DIRAS2Q96HU8 199 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 KCNS3Q9BQ31 491 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 KATNAL1Q9BW62 490 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 PRRG3Q9BZD7 231 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 TLR8Q9NR97 1041 aaKnown RBP15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 ERVK-11Q9UQG0 969 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 LOC100130705A0A1B0GUX0 176 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 A0A1W2PP18 115 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 EPHX2P34913 555 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 RAB25P57735 213 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 RHOAP61586 193 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 SPIBQ01892 262 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 GALNT3Q14435 633 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 SLC10A6Q3KNW5 377 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 MAP1SQ66K74 1059 aaPredicted RBP15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 SLC34A3Q8N130 599 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 NELL1Q92832 810 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 NXF3Q9H4D5 531 aaKnown RBP15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 PCDHGA10Q9Y5H3 936 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 SNX10Q9Y5X0 201 aa15.84■□□□□ 0.13
CLSTN1-201ENST00000361311 KRBA1A5PL33 1030 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 FGF1P05230 155 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 BMP2P12643 396 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 PSMA1P25786 263 aaKnown RBP15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 OR1G1P47890 313 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 INHBCP55103 352 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 KRT33BQ14525 404 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 C9orf57Q5W0N0 161 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 ANKRD13BQ86YJ7 626 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 SCML4Q8N228 414 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 ABHD11Q8NFV4 315 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 OR8H1Q8NGG4 311 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 AURKBQ96GD4 344 aaPredicted RBP15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 Q96MT0 163 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 SMURF2Q9HAU4 748 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 NEK6Q9HC98 313 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 MAPRE3Q9UPY8 281 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 SPATA31D3P0C874 917 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 MBL2P11226 248 aaPredicted RBP15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 GLDCP23378 1020 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 DGKAP23743 735 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 PIGFQ07326 219 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 PABPC1LQ4VXU2 614 aaKnown RBP15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 SPATA31D4Q6ZUB0 917 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 PTCHD4Q6ZW05 846 aa15.83■□□□□ 0.13
CLSTN1-201ENST00000361311 GALNT12Q8IXK2 581 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms